Gene CPF_0054 details

Gene Information

• Locus tag: CPF_0054
• Symbol: recR
• ID: 4203304
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium perfringens ATCC 13124
• Kingdom: Bacteria
• Replicon accession: NC_008261
• Strand: +
• Start bp: 59974
• End bp: 60570
• Gene Length: 597 bp
• Protein Length: 198 aa
• Translation table: 11
• GC content: 32%
• IMG OID: 638080929
• Product: recombination protein RecR
• Protein accession: YP_694520
• Protein GI: 110801227
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0353] Recombinational DNA repair protein (RecF pathway)
• TIGRFAM ID: [TIGR00615] recombination protein RecR

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAATTTT ATCCAGTAGC TATAGAAAAG TTAATTGAAG AGTTTGCTAA ATTACCTAGT 
ATAGGAAAAA AATCAGCTCA AAGATTAACT TTACATATTT TAAATTTGCC AAAGGATGAG 
GTAGAGGAAT TTGCAAATGC CTTAGTAAAA GCAAGAGGAA CTATTAAATA TTGTTCTGTA 
TGTGGTAATT TTACAGATAC AGATCCATGT GCAATATGTT CAAATCCTAA TAGAGAAAAA 
GATATAATAT GTGTGGTTGA ACAACCTAAG GATATTATGA CAATGGAAAA AGTTAAAGAA 
TTTAATGGTT TATATCATGT TTTACATGGA ACTATTTCTC CAATGCAAGG AAGAGGACCA 
CAGGATATAA GAATAAGAGA ATTAGTAGCA AGAATGAGCG GAGATGTAAA AGAGGTTATT 
GTAGCTACAA ACCCTACTAT TGAAGGGGAA GCTACAGCTA TGTATATTTC AAAGATATTA 
AAGCCATTAG ATGTTAAGGT TACTAGAATT GCAGCAGGAA TCCCAGTTGG GGGAGATTTA 
GAGTATGCAG ATGAAGTAAC TTTATCTAAA GCCTTAGAAG GTAGAACTGT TATATAA 

 

Protein sequence

MEFYPVAIEK LIEEFAKLPS IGKKSAQRLT LHILNLPKDE VEEFANALVK ARGTIKYCSV 
CGNFTDTDPC AICSNPNREK DIICVVEQPK DIMTMEKVKE FNGLYHVLHG TISPMQGRGP 
QDIRIRELVA RMSGDVKEVI VATNPTIEGE ATAMYISKIL KPLDVKVTRI AAGIPVGGDL 
EYADEVTLSK ALEGRTVI