| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_0047 |
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| Symbol | lgt |
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| ID | 4201323 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | + |
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| Start bp | 53171 |
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| End bp | 53959 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 638080922 |
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| Product | prolipoprotein diacylglyceryl transferase |
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| Protein accession | YP_694514 |
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| Protein GI | 110798717 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0682] Prolipoprotein diacylglyceryltransferase |
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| TIGRFAM ID | [TIGR00544] prolipoprotein diacylglyceryl transferase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000638304 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATCCAG TAGCATTTTC AATTGGTAGT TTTGAAGTAA GGTGGTATGG CATAATCATA
GCATTAGGAA TTTTAATTGC AATGACCTTG GTAAGTATTA ACGCAAAGAA AAAGAATTTA
AACTTTGATG TTATCTTAGA TTTATTTTTA TGGTGCTTTC CTTTTGCTAT TATAGGGGCT
AGAGCATATT ACGTGCTTTT TGAGCTTGAA AATTATCATA GCTTTTGGGA TATGATAAAC
ATAAGACAAG GTGGATTAGC GATTCATGGA GGAATAATAG GAGCTTTCTT AACTGCATTT
ATTTATTGTA AGGTTAAAAA AGTAGATTTT TTAGCCTATG CAGATATTGT GGCTCCAGCT
TTTATATTAG CTCAAGGAAT AGGTAGATGG GGGAATTTTT TTAACCAAGA GGCTCATGGT
GGACAAGTAA CTAGTGAGTT TATTAGTAAA TTTCCTGAGT TTATTCAAAG GGGTATGTAC
ATAAATGGAG CATATTATCA TCCTACATTC TTATATGAAA GTATATGGGA TATATTTGTG
GCCATTTTAT TGATGATAAT TTTATATAAT ATTACAGATA GATATAAGGG AGTAGTTATT
TCTGCTTATA TATCTTTATA TTCTCTAGGA AGATTCTTTA TTGAAGGGCT AAGAACAGAT
AGTTTATATT TTATGAATAT TAGAGTTGCT CAATTAGTTA GCTTACTAGG AATTATTATT
GGAATTGTGG CAATAATAAT TATTGTTTCA AGAGGAAAGA AAAAGAGAAA AGGTATATTT
ATAAATTAG
|
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| Protein sequence | MNPVAFSIGS FEVRWYGIII ALGILIAMTL VSINAKKKNL NFDVILDLFL WCFPFAIIGA
RAYYVLFELE NYHSFWDMIN IRQGGLAIHG GIIGAFLTAF IYCKVKKVDF LAYADIVAPA
FILAQGIGRW GNFFNQEAHG GQVTSEFISK FPEFIQRGMY INGAYYHPTF LYESIWDIFV
AILLMIILYN ITDRYKGVVI SAYISLYSLG RFFIEGLRTD SLYFMNIRVA QLVSLLGIII
GIVAIIIIVS RGKKKRKGIF IN
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