Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_0045 |
Symbol | |
ID | 4202936 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | + |
Start bp | 51280 |
End bp | 52173 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 638080920 |
Product | putative permease |
Protein accession | YP_694512 |
Protein GI | 261876155 |
COG category | [R] General function prediction only |
COG ID | [COG0701] Predicted permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.151776 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGCTTT TAAATAAATT TTCTATAGTC TTTTCTAGTA TAGTAATAGA AGCACTGCCT TTTATACTTA TAGGGGCAGT GCTAGCTTCC TTTATGCAAG TTTATATTTC AAATAATATT TTTAATAAAA TTATATCTAA AAATAAATTA TTAGGATCAA TTCAAGCTGG GATAATAGGA GTTTTTTTAC CTGTTTGTGA ATGTGCCACA GTGCCTATAA CAAAGGGATT ATTAAATAAA AAGGTACCTT TAAATGTGGC CATAACTTAC ATGTTGGCGG CTCCTATAGT TAATCCACTG GTTATATTAT CAACATATTA TGCTTTTGAT GGAAACATAA AGGTAGTATT GTTGAGAGTG GGCGTAGGCT TTTCAATAGC TGTCATAGCT GGGCTACTTA TGCTTTGTTT AAGTGGAGAA AATAATATTT TCATAGATAA TGGTGAGGGA GAATTACAAG GAAAATGTCT TTGTGGATGT TCAGAAATAG ATGATAATTC TAGTAAACTT ATAAGGCTTT TAAAGCATAC ATCCTTAGAG TTTTATGAAA TAGGAAAATA TTTTATAGTT GGAGCAACTT TAGCTGCCAT ATTTCAAACC TTTGTACCAA GGGATATTAT TTTTTATTTT GAAAATAGTG CAGTTTTATC AATAATAATC CTTATGGCTT TTTCATTCTT AATTTCCTTG TGTTCAGAGG CAGATGCCTT TGTTGCTAGT ACCTTTATGA ATAGATTTTC TTTAGGATCA ATAACTGGAT TTTTGATTAT AGGTCCTATG ATAGATTTAA AAAATACAAT AATGTTATTT TCTATATTTA AAAAATCCTT TGTAATTAAA CTTTTATTTG TAGTCTTTTC ACTTTGCTTC ATAGCTTCAG CTTTGATATT TTAA
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Protein sequence | MELLNKFSIV FSSIVIEALP FILIGAVLAS FMQVYISNNI FNKIISKNKL LGSIQAGIIG VFLPVCECAT VPITKGLLNK KVPLNVAITY MLAAPIVNPL VILSTYYAFD GNIKVVLLRV GVGFSIAVIA GLLMLCLSGE NNIFIDNGEG ELQGKCLCGC SEIDDNSSKL IRLLKHTSLE FYEIGKYFIV GATLAAIFQT FVPRDIIFYF ENSAVLSIII LMAFSFLISL CSEADAFVAS TFMNRFSLGS ITGFLIIGPM IDLKNTIMLF SIFKKSFVIK LLFVVFSLCF IASALIF
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