Gene CPF_0037 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_0037 
Symbol 
ID4201367 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand+ 
Start bp44245 
End bp44676 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content34% 
IMG OID638080912 
Productcytidine/deoxycytidylate deaminase family protein 
Protein accessionYP_694504 
Protein GI110798954 
COG category[F] Nucleotide transport and metabolism
[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0590] Cytosine/adenosine deaminases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTTAGTT TAGCTTTGGA AGAGGCAGAA AAAGCAAGAG AAAAGGGAGA AGTTCCTGTA 
GGAGCTGTAA TAGTAAAGGA TGGAGAAATC ATTGCAAGGG CTCATAATTT AAAGGAGACT 
TTAAAAGATC CAACAGCTCA TGCAGAAATT CTTGCCATAA GAGAAGCTTG TAATAAACTA 
AATAATTGGA GACTTCATGG TTGCGAGATG TATGTTACTT TAGAGCCTTG TCCTATGTGT 
GCTGGAGCTA TTCTTCAAAG TAGACTTTCA AAAATTTATA TTGGTACCTT TGATGATACA 
ACAGGAGCAG CTGGTTCTGT AGTTAATATT CTTCAAAATC ATAATCTAAA TTATTTTCTT 
GAAGTAGTTT GGGAGAATGA TGAAAAATGT AGTAAAATAT TAACAAAATT TTTCAAAGAT 
AGACGAGGGT AA
 
Protein sequence
MLSLALEEAE KAREKGEVPV GAVIVKDGEI IARAHNLKET LKDPTAHAEI LAIREACNKL 
NNWRLHGCEM YVTLEPCPMC AGAILQSRLS KIYIGTFDDT TGAAGSVVNI LQNHNLNYFL 
EVVWENDEKC SKILTKFFKD RRG