Gene CPF_0032 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_0032 
Symbol 
ID4201778 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp39832 
End bp40971 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content25% 
IMG OID638080907 
Producthypothetical protein 
Protein accessionYP_694500 
Protein GI110798802 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.65464 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTATG ATTTTATAAT TACGATTTTA GATGAACATA ATGAATCAAG TATTTTATTA 
GCTGAAAAGT TAAAGCCTAA AGAGATAATT TATTTATACA AAAAGGATGA AGAATTAAAG
GTTTTAAATT CATTGAGACA GTTTTATTTA AATAAATTTC CTAATTGCAA TTTTAGTGAT
GAAAAGTTAG GGAAGGATAC TATTTCATCC ATAGAAGAAA TTATAAAGAG AATGAAAAGT
AAAAATACAG CTATATGTTT AAATCAAGGG AATAAAAAGG ATATTTTAAT AATGTATACC
CTAGCATTAA AACATAATAT AGATGGTTTT TTTCTGGATA TACCTAAAGA GGAACTTTTA
AAGTTAAATT TAGAAAGTGT ACAATGTGAA AAGTGTAATT TCGTAGATTT GGATGTAGAA
GACATCATAG ACAGTATAGG GGCTTCTATT GTTGTGGATT CAACAGAAAT TTCAGAGATA
AATATTATAG AGACCATGAC TAACTATATA GCTAGTAATT TAGATCTTTG GAAAAAGTAT
AAAATAAGGT TAAGTGATAA TTCTGTTTTT ATCCATGATG AATCAAATCC TAGAAGTATA
AAAATAGATA AGGAATTATT GAGCAGAGAA GAAGTTATGC TTCTTGATAA AATACTTAAC
TTTTTAGAGA AAAATGGCCA AATAAAAGTA AAAGAATTAG AGCAATGTTT AAAGGTAACA
TTCCAAAATG AATTTATAAA AGGATTTATT TTTAAAAGTG GAACATGGCT TGAAGTTTTA
ACAAAAAATA TTATTGAAGA AATAAAAAGC ATTGATGATA TAAAAAGTGG TTTATTATTT
CTTTGGAATG ATAAGGAATC TAGAGTTAAA AATGAGCTAG ATGTTGTTGC CATAAAGGAT
TCAGTGCTTA TTTGTGTTTC TTGTAAGGAT TCAAAAAAAT ATGATGAAGT TGCCTTAAAT
GAATTAAATG TTTATTCTGA GCAATTAGGA GGAGAAAATG TAATAAAAAT ATTAGTAGCA
ACACACCCTC CAATTAAATC ATCTATTTCA AAAAGAGCTA AAGAGATGGG AATAAATTTA
GTTGTTTTTG ATGGGAATAA AAAAGCATTT AAAGAAGAAT TAGAAAAAAT AATAAAATAA
 
Protein sequence
MNYDFIITIL DEHNESSILL AEKLKPKEII YLYKKDEELK VLNSLRQFYL NKFPNCNFSD 
EKLGKDTISS IEEIIKRMKS KNTAICLNQG NKKDILIMYT LALKHNIDGF FLDIPKEELL
KLNLESVQCE KCNFVDLDVE DIIDSIGASI VVDSTEISEI NIIETMTNYI ASNLDLWKKY
KIRLSDNSVF IHDESNPRSI KIDKELLSRE EVMLLDKILN FLEKNGQIKV KELEQCLKVT
FQNEFIKGFI FKSGTWLEVL TKNIIEEIKS IDDIKSGLLF LWNDKESRVK NELDVVAIKD
SVLICVSCKD SKKYDEVALN ELNVYSEQLG GENVIKILVA THPPIKSSIS KRAKEMGINL
VVFDGNKKAF KEELEKIIK