Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_0032 |
Symbol | |
ID | 4201778 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | + |
Start bp | 39832 |
End bp | 40971 |
Gene Length | 1140 bp |
Protein Length | 379 aa |
Translation table | 11 |
GC content | 25% |
IMG OID | 638080907 |
Product | hypothetical protein |
Protein accession | YP_694500 |
Protein GI | 110798802 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.65464 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAATTATG ATTTTATAAT TACGATTTTA GATGAACATA ATGAATCAAG TATTTTATTA GCTGAAAAGT TAAAGCCTAA AGAGATAATT TATTTATACA AAAAGGATGA AGAATTAAAG GTTTTAAATT CATTGAGACA GTTTTATTTA AATAAATTTC CTAATTGCAA TTTTAGTGAT GAAAAGTTAG GGAAGGATAC TATTTCATCC ATAGAAGAAA TTATAAAGAG AATGAAAAGT AAAAATACAG CTATATGTTT AAATCAAGGG AATAAAAAGG ATATTTTAAT AATGTATACC CTAGCATTAA AACATAATAT AGATGGTTTT TTTCTGGATA TACCTAAAGA GGAACTTTTA AAGTTAAATT TAGAAAGTGT ACAATGTGAA AAGTGTAATT TCGTAGATTT GGATGTAGAA GACATCATAG ACAGTATAGG GGCTTCTATT GTTGTGGATT CAACAGAAAT TTCAGAGATA AATATTATAG AGACCATGAC TAACTATATA GCTAGTAATT TAGATCTTTG GAAAAAGTAT AAAATAAGGT TAAGTGATAA TTCTGTTTTT ATCCATGATG AATCAAATCC TAGAAGTATA AAAATAGATA AGGAATTATT GAGCAGAGAA GAAGTTATGC TTCTTGATAA AATACTTAAC TTTTTAGAGA AAAATGGCCA AATAAAAGTA AAAGAATTAG AGCAATGTTT AAAGGTAACA TTCCAAAATG AATTTATAAA AGGATTTATT TTTAAAAGTG GAACATGGCT TGAAGTTTTA ACAAAAAATA TTATTGAAGA AATAAAAAGC ATTGATGATA TAAAAAGTGG TTTATTATTT CTTTGGAATG ATAAGGAATC TAGAGTTAAA AATGAGCTAG ATGTTGTTGC CATAAAGGAT TCAGTGCTTA TTTGTGTTTC TTGTAAGGAT TCAAAAAAAT ATGATGAAGT TGCCTTAAAT GAATTAAATG TTTATTCTGA GCAATTAGGA GGAGAAAATG TAATAAAAAT ATTAGTAGCA ACACACCCTC CAATTAAATC ATCTATTTCA AAAAGAGCTA AAGAGATGGG AATAAATTTA GTTGTTTTTG ATGGGAATAA AAAAGCATTT AAAGAAGAAT TAGAAAAAAT AATAAAATAA
|
Protein sequence | MNYDFIITIL DEHNESSILL AEKLKPKEII YLYKKDEELK VLNSLRQFYL NKFPNCNFSD EKLGKDTISS IEEIIKRMKS KNTAICLNQG NKKDILIMYT LALKHNIDGF FLDIPKEELL KLNLESVQCE KCNFVDLDVE DIIDSIGASI VVDSTEISEI NIIETMTNYI ASNLDLWKKY KIRLSDNSVF IHDESNPRSI KIDKELLSRE EVMLLDKILN FLEKNGQIKV KELEQCLKVT FQNEFIKGFI FKSGTWLEVL TKNIIEEIKS IDDIKSGLLF LWNDKESRVK NELDVVAIKD SVLICVSCKD SKKYDEVALN ELNVYSEQLG GENVIKILVA THPPIKSSIS KRAKEMGINL VVFDGNKKAF KEELEKIIK
|
| |