| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_0030 |
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| Symbol | |
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| ID | 4203321 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | - |
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| Start bp | 38520 |
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| End bp | 39395 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 638080905 |
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| Product | degV family protein |
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| Protein accession | YP_694499 |
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| Protein GI | 110801244 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1307] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR00762] EDD domain protein, DegV family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAAAAAT TTGTTATATT TACTGATTCG GCAGCTGATC TGCCAAAAAG CATGGTAAAA
GATTTAGATA TTAATTATTT AGGACTTATA TGTAATATTA ATAATACAGA ATATATTGAT
AATATTGATA GCGAATTAAC TCCAAAAGCT TTCTATAATA AATTAAGAGA AGGTATCATG
CCATCAACAA GCCAAGTAAA CTCATTTAGA TTTGTTGAAG CCTTTGAAGA ATATGTTAAA
CAAGGGATCT CTATTTTATA CTTAGCATTT TCATCAGCCT TAAGTGGAAC ATATAATAGT
TCACTTATAG CTAGAGAGGA ATTATTAGAA AAATATCCTG ATGCTGATAT AAAGATAGTA
GATACTAGAG CTGCATGCCT AGGTCAAGGA TTACTAGTTT ATTATGCTGC TCAAATGAAA
AAGGATGGAA AATCTATAGA TGAAATCTAC TCTTGGGTAG AAGAAAACAA AAATAAGTTA
TGTCATTACT TTACAGTAGA TAGCTTAGAT CATCTAAAAA GAGGGGGAAG AATTTCATCT
ACAGCAGCAG CTATTGGTAG CTTATTAAGT ATAAAGCCAA TGCTATATGT AAATGATGCA
GGTGAACTTC ATAACTTTGC TAAGGCTAAG GGAAGAAAAA AATCTTTAAA AATGTTATTC
CAAGAGCTTG AAAAGCGTAT TGTAAACCCT AATGAACAAA CAATTTTTAT TGCTCATAGT
GATTGTATTG AAGATGCAGA GACTTTAGCA GAAATGATTA GAGAAAAATA TACTGTAAAA
GACATAATTA TAGATTATAT AGGAATAGTT ATAGGTTCTC ACACAGGTAT AGGAACATTA
GCTGTCTTCT TTTTAGGGGA TACAAAAGAA CCTTAA
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| Protein sequence | MKKFVIFTDS AADLPKSMVK DLDINYLGLI CNINNTEYID NIDSELTPKA FYNKLREGIM
PSTSQVNSFR FVEAFEEYVK QGISILYLAF SSALSGTYNS SLIAREELLE KYPDADIKIV
DTRAACLGQG LLVYYAAQMK KDGKSIDEIY SWVEENKNKL CHYFTVDSLD HLKRGGRISS
TAAAIGSLLS IKPMLYVNDA GELHNFAKAK GRKKSLKMLF QELEKRIVNP NEQTIFIAHS
DCIEDAETLA EMIREKYTVK DIIIDYIGIV IGSHTGIGTL AVFFLGDTKE P
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