| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_0027 |
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| Symbol | yhaM |
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| ID | 4202828 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | + |
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| Start bp | 34839 |
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| End bp | 35810 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 638080902 |
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| Product | 3'-5' exoribonuclease YhaM |
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| Protein accession | YP_694496 |
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| Protein GI | 110799108 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3481] Predicted HD-superfamily hydrolase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.838244 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAAATAC CGGTAAAAAA AATAGGTGAG TTCGTTAAAG GAGAAAGAGT CGAAGGTTTT
TTTCTTTTAA AATCAGTTAC TTTAAAAACT ACTAATTCTG GTGGAAAAAA ATATTTAGAT
TTAGTTTTAA GTGATAAAAC TGGTGATATA TTAGGTAAAG TATGGGAGAT TAAACCTGAG
CATGAAGAAT TAAAAAGCAA TACAGTATTT AAGATTAGAG GTACGGTGAA TAGTTGGCAG
GGAACTTTAC AGTTAAAAGT GGAACATGCT AGCAAGGTTA CTGAAGAAGA TAATATAAAC
TTAGATGATT TTGTTCAGAG TGCGCCATAT ACTAGCGATG AAATGTTTAA TACTATAAAA
GATACTGTTC ATAATATGAA TGATGTGGAT ATAAAAAATA TTCTAAATAG AGTTTTAGAG
ATTAATAAGG ATAAACTTAT GTACTATCCA GCAGCAAAGT CAAATCATCA CTCTATAAAG
GGTGGACTTT TATATCACAT AACAACTATG TTAAAGTTAG CTGAGAATAT TTGTGGAATA
TATGATTTCT TAAACAGAGA TTTAGTTTAT GCAGGGGTAA TACTTCATGA TATGGCTAAA
ATCAAAGAGA TGTCTTCTAA TGAAATGGGC ATAGTAGATG AATATACTTT AGAGGGAACT
CTACTTGGAC ATATTACTCA AGGAATAAAG GAAATTGAGG TAATAGGAAA AGAAGTTAAT
GCTGATAGCA AGATTATAAT GTTACTTCAA CATATGGTCT TATCACATCA CTATGAGCCT
GAATATGGAA GTCCTGTTAA GCCTCTTATA CCAGAAGCTG AGATGTTACA TTATTTAGAT
GTAATGGATG CTAGAATGTA CGATATGAAA AAAGCAATTA AGGAAACTAA GGAAAATGAA
TTCTCAGAAA GAATTTGGTC TTTAGATAGT AGAAGAATAT ACAATCATGG AATGTATGAA
AAAAATAATT AA
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| Protein sequence | MEIPVKKIGE FVKGERVEGF FLLKSVTLKT TNSGGKKYLD LVLSDKTGDI LGKVWEIKPE
HEELKSNTVF KIRGTVNSWQ GTLQLKVEHA SKVTEEDNIN LDDFVQSAPY TSDEMFNTIK
DTVHNMNDVD IKNILNRVLE INKDKLMYYP AAKSNHHSIK GGLLYHITTM LKLAENICGI
YDFLNRDLVY AGVILHDMAK IKEMSSNEMG IVDEYTLEGT LLGHITQGIK EIEVIGKEVN
ADSKIIMLLQ HMVLSHHYEP EYGSPVKPLI PEAEMLHYLD VMDARMYDMK KAIKETKENE
FSERIWSLDS RRIYNHGMYE KNN
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