Gene CPF_0022 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_0022 
Symbol 
ID4203812 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp24771 
End bp25652 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content26% 
IMG OID638080897 
Producthypothetical protein 
Protein accessionYP_694491 
Protein GI110800432 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.928419 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGTTG AAAAACTAAA TGATATTAAA AATAATTCTA AAGAAATTAT TTTTAATAGT 
AATTCTAAAA TAGTCTTATT TAGTGATTGT CATAGGGGAG ATGGAACATA TAAAGATAGT
TTAGCTCCTA ATATCAACAT TTATCTATCA GCTATAAGGT ATTATTATAA AAATAAATTT
ACTTATATAG AAGTTGGAGA TGGTGATGAA TTATGGAAGT TTAAAGATAT ACAAGAGATA
TATGATATGA ATTATGAGAT CTATGAAGTT TTAGAAGAAT TTAAAGAAAA AAATAGACTT
TATATGATAT ATGGAAATCA TGATAAGGAT AAGAGTAAAA TAAAGTTTTT AAGGAAAAAC
AAGAGAAGAA ATAGATTTAA TCACTCTGCT TCAGATTTTT ATAGTACTTT AGAGATATAT
GAATCTTTAG TACTAGTGCA TGAAGAAAGT AAAAAAGATT TTTTTGTAAT TCATGGTCAT
CAAATAGACT TTTTAAATAA TGAATTAGCC TTTTTATCAA AATTTTTAGT GAGATATGTC
TGGGCTATTT TAGAGGCTTT TATGGGATTT AAAGATCCTA CAAGTCCTGC AAAAAGTAAT
AATAAAAGAA ATTTATTTGA TGAGAAAATA AGTAAGTGGG CAGAGGAAAA TAAAACTAGA
GTTATTTTAG GACATACGCA TAAAACACTA TTTCCTAAGA GTAGGAATGA ATCAACATAC
TTTAACATAG GGTGCTGTGT ATTACCTAGA ACTATTACAG CTATAGAAAT TGAGAGGGGC
GAGATTTCAC TTATAAAGTG GACAATAAAG GCTGATGAAA AGGGATCACT TTTTGTTGGA
AGAGATATTA TAGGTGGACC TATTAGAATA GAAAATTATT AA
 
Protein sequence
MKVEKLNDIK NNSKEIIFNS NSKIVLFSDC HRGDGTYKDS LAPNINIYLS AIRYYYKNKF 
TYIEVGDGDE LWKFKDIQEI YDMNYEIYEV LEEFKEKNRL YMIYGNHDKD KSKIKFLRKN
KRRNRFNHSA SDFYSTLEIY ESLVLVHEES KKDFFVIHGH QIDFLNNELA FLSKFLVRYV
WAILEAFMGF KDPTSPAKSN NKRNLFDEKI SKWAEENKTR VILGHTHKTL FPKSRNESTY
FNIGCCVLPR TITAIEIERG EISLIKWTIK ADEKGSLFVG RDIIGGPIRI ENY