Gene CPF_0010 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_0010 
Symbol 
ID4202615 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp15422 
End bp15925 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content24% 
IMG OID638080885 
Producthypothetical protein 
Protein accessionYP_694483 
Protein GI110799285 
COG category 
COG ID 
TIGRFAM ID[TIGR00277] uncharacterized domain HDIG 


Plasmid Coverage information

Num covering plasmid clones53 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGTATA GAATAAAGCA ATTTTTATGG GCTATTTCTG CAAATTTTAA AGAGTTAGAT 
TATAGTTATG TAAGATCAAT CTTAAATGAT TATGAGTTTA GTTTATTTAA GAGATTGAAA
AAAGGAGAAC AGTTACATTC TATAAAGGTT TCTAAAGATT GTGTTAATTT AGCTAAGAGT
AAAGGGATAA ATTCAGAGAG TGAATTAAAA ATTTTTTCTA AGCTAGGATT ATTACATGAC
ATAGGAAAAT TATATTATCC TTTAAATATA ATGACAAAGT CATTTTTAGT GTTAGGTAAA
AAAATATCTA AAAATAGAAT AAGTAAATTT CAAAATATAA AACCAATATA TATTTATTAT
AATCATGGTG ATAAGGCATT TGATTATCTA AGGGAAGATG ATTATGATAA GGAGTTTGTA
GAAGCAATTA GAGGACATCA CTCTATTAAA TCTAGTAAAA ACATATTGCT ATGTATATTA
AAAGAAGCTG ATGATATGAA TTAA
 
Protein sequence
MSYRIKQFLW AISANFKELD YSYVRSILND YEFSLFKRLK KGEQLHSIKV SKDCVNLAKS 
KGINSESELK IFSKLGLLHD IGKLYYPLNI MTKSFLVLGK KISKNRISKF QNIKPIYIYY
NHGDKAFDYL REDDYDKEFV EAIRGHHSIK SSKNILLCIL KEADDMN