Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_0002 |
Symbol | dnaN |
ID | 4202178 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | + |
Start bp | 2079 |
End bp | 3179 |
Gene Length | 1101 bp |
Protein Length | 366 aa |
Translation table | 11 |
GC content | 28% |
IMG OID | 638080874 |
Product | DNA polymerase III subunit beta |
Protein accession | YP_694477 |
Protein GI | 110798947 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
TIGRFAM ID | [TIGR00663] DNA polymerase III, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.279408 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGATATTTA CATGTGACAA AAATAAATTA CAAGAATCTA TAGCTATAGC TCAAAAAGCT ATAACTGGAA AATCAACAAT GCCTATCTTA GAAGGTCTAT ACATAGAAGC TTCTGAGAAC ATAGTAACTA TAATAGGATC AGATAAAGAT GTTAGTATAG AAACTAAATT TGAAGCTGAT GTTACTGAAC CAGGGAAGTT AGTTGTTGAT GCTAAAATAT TTGGAGAGAT AATAAGAAAG TTACCTAACG ATAAAATTAA AATAGAAACA GTATCAGAAG AAGCTATAAG AATAACTTGT CAAAAATCTG TATTTGATTT ATTACATATG AATGCAGAAG ATTTTCCAAG CTTACCTAAG ATAAACGAGA ATATGATATT CTCAATAAAC CAAGGAATTC TTAAAAATAT GATAAAAGGA ACTTCTTTTG CCATAGCTCA AGATGAAACT AGACCTATTC TTCAAGGTAT ATTATTCGAA ATTAAGGACT CTAAATTAAA CTTAGTAGCT TTAGATGGAT ATAGATTAGC AATAAGAACA GAGAATATAG ATACTAACAA TACAATTAAT GCTGTTATAC CAGGAAAGAC ACTTAACGAA GTAGCTAAGA TATTAGAAGA TTCAGAGGAA ATAGTCAACA TAACATTTAC CCCAAATCAC ATATTATTTA ATATGGGAGA TACAAAAGTT ATTTCTAGAT TGCTAGAAGG TGAATTCATA AAGTATGATG CCTTATTACC AAAAGAACAT AAGTTACAAA TTGAAGTTGA TAAACAAACT CTTCAAAATG GTATTGAAAG AGCATCTCTT ATGGCTAAGG AAGGAAATAG TAACTTAGTT AAGTTTGATA TAACTGATGA AAATATAGTA ATCACATCTA ATTCTCAATT AGGAAAAGTT AGAGAAGAGG TTACTATCAA ATTGCAAGGA GATGAAATTC AAATTGCATT TAACTCAAAA TACTTACTAG ATGTTTTAAA AAATATGGAA GAGGACAAAA TAGAATTAAG AATGACAAGT AGCATATCTC CATGTATTAT AAGAAATAAG AACAATGATT TATGTGAATA TTTAGTTCTA CCTGTTAGAA TAGCAAGATA A
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Protein sequence | MIFTCDKNKL QESIAIAQKA ITGKSTMPIL EGLYIEASEN IVTIIGSDKD VSIETKFEAD VTEPGKLVVD AKIFGEIIRK LPNDKIKIET VSEEAIRITC QKSVFDLLHM NAEDFPSLPK INENMIFSIN QGILKNMIKG TSFAIAQDET RPILQGILFE IKDSKLNLVA LDGYRLAIRT ENIDTNNTIN AVIPGKTLNE VAKILEDSEE IVNITFTPNH ILFNMGDTKV ISRLLEGEFI KYDALLPKEH KLQIEVDKQT LQNGIERASL MAKEGNSNLV KFDITDENIV ITSNSQLGKV REEVTIKLQG DEIQIAFNSK YLLDVLKNME EDKIELRMTS SISPCIIRNK NNDLCEYLVL PVRIAR
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