Gene CHU_3811 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3811 
SymbolblgA 
ID4184705 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp4399997 
End bp4401385 
Gene Length1389 bp 
Protein Length462 aa 
Translation table11 
GC content43% 
IMG OID638073797 
Productb-glucosidase 
Protein accessionYP_680386 
Protein GI110640176 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2723] Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase 
TIGRFAM ID[TIGR03356] beta-galactosidase 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.584755 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATACTTT CTGAGCCTAA AGCATCTTTA GAAAAAGATG CTTCGACTTT ATATGCGTAT 
AAAAAACAAC TGGATGCTTC TTTCGTTTGG GGCGTATCTG CCTCAGCGTA TCAAACAGAA
GGAGCCTATA ACATAGATGG TAAAGGTCCT TCCATATGGG ATACCTTTAC AAATGAAAAT
AAAAATAAGA TCAAGGACAG AAAAAACGCA AACATTGCCT GCGATTTTTA TTCCCGTTAT
GAAGATGATC TGAAACTCAT GCAATCGCTG GGCATCAATC ATTTTCGTTT TTCAATTTCC
TGGTCGCGCA TCCTGCCTTC GGGCACGGGT GAGATTAATC CGGCAGGCAT TGCTTTTTAC
GATCGTTTAA TTGATACCTG TCTGCGTTAC GGCATCACAC CCTGGGTAAC CCTTTATCAC
TGGGACTTAC CGCAGGCGCT GGAAAAGCGT GGCGGCTGGA CGAACAGAGA AGTTGTAAAC
TGGTTTACCG GATATGTTGC CATATGCGTC AAACACTTTG GTGACCGCGT GCAGCACTGG
ATGGTAATGA ATGAACCGAT GGTGTTTGTT GGTGCAGGTT ATTTTTTAGG CTTACATGCA
CCCGGCCGCA GAGGCATGAA AAATTTTCTT CCCGCTATCC ACCATGCCGT ATTAAGTATG
TGCGAAGGTG CACGTGCTAT CAAATCCATT TATCCCAATG CTACAGTAGG TACTACATTT
TCCTGCTCAC ACATTGAGCC TTACCGCAAT ATTGAGAAAG ATCACCTGGC TGCGTATAAA
GTAGATGCGC TGTTAAACCG TATGTTCATT GAACCAACGC TTGGTATGGG CTATCCGATT
GATACCTTAA AACCCCTGCA GAATATTCAT CAGTATATTC TGCCCGGCGA TGAGTATAAG
ATGAAATATG ATTTTGATTT TATTGGTGTT CAGAATTATA CACGTGAATT TGTAAAACAT
TCCTGGTTTA CGCCTTACCT GAATGCGCGC CTTATCACGG CCCCAAACCG GAAGGTGCCG
CATACCTTAA TGAACTGGGA AGTTTATCCG GAATCTATTT ATCATATGAT CAGAAAATTT
GATGCGTATC CTGGCATTAA AAAAATCCTG ATCACAGAGA ATGGCGCTGC CTTTGAAGAC
ACACATCACG AGAGTCTAAT ATCCGATCAT TTACGGACCA CGTATTTGCA GGATCATATT
GAACAGGTTT TACGTGCGCG GGCCGAAGGC TCAAAAGTTG ATGGGTATTT TGTCTGGACC
TGGACAGATA ATTTTGAATG GGCGGAAGGC TATCATCCGC GCTTTGGCTT GATATACACC
GACTTTAAAA ATCAAAACAG AATTGTAAAA GAATCAGGTC TCTGGTATGG TTCTTTTATT
CGGGAATAA
 
Protein sequence
MILSEPKASL EKDASTLYAY KKQLDASFVW GVSASAYQTE GAYNIDGKGP SIWDTFTNEN 
KNKIKDRKNA NIACDFYSRY EDDLKLMQSL GINHFRFSIS WSRILPSGTG EINPAGIAFY
DRLIDTCLRY GITPWVTLYH WDLPQALEKR GGWTNREVVN WFTGYVAICV KHFGDRVQHW
MVMNEPMVFV GAGYFLGLHA PGRRGMKNFL PAIHHAVLSM CEGARAIKSI YPNATVGTTF
SCSHIEPYRN IEKDHLAAYK VDALLNRMFI EPTLGMGYPI DTLKPLQNIH QYILPGDEYK
MKYDFDFIGV QNYTREFVKH SWFTPYLNAR LITAPNRKVP HTLMNWEVYP ESIYHMIRKF
DAYPGIKKIL ITENGAAFED THHESLISDH LRTTYLQDHI EQVLRARAEG SKVDGYFVWT
WTDNFEWAEG YHPRFGLIYT DFKNQNRIVK ESGLWYGSFI RE