Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_3811 |
Symbol | blgA |
ID | 4184705 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 4399997 |
End bp | 4401385 |
Gene Length | 1389 bp |
Protein Length | 462 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638073797 |
Product | b-glucosidase |
Protein accession | YP_680386 |
Protein GI | 110640176 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2723] Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase |
TIGRFAM ID | [TIGR03356] beta-galactosidase |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.584755 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATACTTT CTGAGCCTAA AGCATCTTTA GAAAAAGATG CTTCGACTTT ATATGCGTAT AAAAAACAAC TGGATGCTTC TTTCGTTTGG GGCGTATCTG CCTCAGCGTA TCAAACAGAA GGAGCCTATA ACATAGATGG TAAAGGTCCT TCCATATGGG ATACCTTTAC AAATGAAAAT AAAAATAAGA TCAAGGACAG AAAAAACGCA AACATTGCCT GCGATTTTTA TTCCCGTTAT GAAGATGATC TGAAACTCAT GCAATCGCTG GGCATCAATC ATTTTCGTTT TTCAATTTCC TGGTCGCGCA TCCTGCCTTC GGGCACGGGT GAGATTAATC CGGCAGGCAT TGCTTTTTAC GATCGTTTAA TTGATACCTG TCTGCGTTAC GGCATCACAC CCTGGGTAAC CCTTTATCAC TGGGACTTAC CGCAGGCGCT GGAAAAGCGT GGCGGCTGGA CGAACAGAGA AGTTGTAAAC TGGTTTACCG GATATGTTGC CATATGCGTC AAACACTTTG GTGACCGCGT GCAGCACTGG ATGGTAATGA ATGAACCGAT GGTGTTTGTT GGTGCAGGTT ATTTTTTAGG CTTACATGCA CCCGGCCGCA GAGGCATGAA AAATTTTCTT CCCGCTATCC ACCATGCCGT ATTAAGTATG TGCGAAGGTG CACGTGCTAT CAAATCCATT TATCCCAATG CTACAGTAGG TACTACATTT TCCTGCTCAC ACATTGAGCC TTACCGCAAT ATTGAGAAAG ATCACCTGGC TGCGTATAAA GTAGATGCGC TGTTAAACCG TATGTTCATT GAACCAACGC TTGGTATGGG CTATCCGATT GATACCTTAA AACCCCTGCA GAATATTCAT CAGTATATTC TGCCCGGCGA TGAGTATAAG ATGAAATATG ATTTTGATTT TATTGGTGTT CAGAATTATA CACGTGAATT TGTAAAACAT TCCTGGTTTA CGCCTTACCT GAATGCGCGC CTTATCACGG CCCCAAACCG GAAGGTGCCG CATACCTTAA TGAACTGGGA AGTTTATCCG GAATCTATTT ATCATATGAT CAGAAAATTT GATGCGTATC CTGGCATTAA AAAAATCCTG ATCACAGAGA ATGGCGCTGC CTTTGAAGAC ACACATCACG AGAGTCTAAT ATCCGATCAT TTACGGACCA CGTATTTGCA GGATCATATT GAACAGGTTT TACGTGCGCG GGCCGAAGGC TCAAAAGTTG ATGGGTATTT TGTCTGGACC TGGACAGATA ATTTTGAATG GGCGGAAGGC TATCATCCGC GCTTTGGCTT GATATACACC GACTTTAAAA ATCAAAACAG AATTGTAAAA GAATCAGGTC TCTGGTATGG TTCTTTTATT CGGGAATAA
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Protein sequence | MILSEPKASL EKDASTLYAY KKQLDASFVW GVSASAYQTE GAYNIDGKGP SIWDTFTNEN KNKIKDRKNA NIACDFYSRY EDDLKLMQSL GINHFRFSIS WSRILPSGTG EINPAGIAFY DRLIDTCLRY GITPWVTLYH WDLPQALEKR GGWTNREVVN WFTGYVAICV KHFGDRVQHW MVMNEPMVFV GAGYFLGLHA PGRRGMKNFL PAIHHAVLSM CEGARAIKSI YPNATVGTTF SCSHIEPYRN IEKDHLAAYK VDALLNRMFI EPTLGMGYPI DTLKPLQNIH QYILPGDEYK MKYDFDFIGV QNYTREFVKH SWFTPYLNAR LITAPNRKVP HTLMNWEVYP ESIYHMIRKF DAYPGIKKIL ITENGAAFED THHESLISDH LRTTYLQDHI EQVLRARAEG SKVDGYFVWT WTDNFEWAEG YHPRFGLIYT DFKNQNRIVK ESGLWYGSFI RE
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