Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_3797 |
Symbol | araC |
ID | 4184133 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 4386525 |
End bp | 4387298 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 638073783 |
Product | AraC family transcriptional regulator |
Protein accession | YP_680372 |
Protein GI | 110640162 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.101891 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGGAT TTTCAGTATA CATACCTTGT GATGCATTAA AGCCATTTGT TAAAAGTCTG GCTATTTCAG AAAATGAACA CGAACAGGTT TATAAAGTAA TTCCGGATAC AGCCCTTGTT TTAGGTTTTC AATACAAAGG AAAACTGGCG TATCTAGATG GGTCAAATGA ATTGCCGCTG GCACGTTCGG GTGTAAGCGG ACTGAGTGAT CACTATAAAA TATTTAAAAA CTCGGCGGGT ATTGGTACCG TGCTGGTTTT CTTTACAGAA ACCGGAGCAG CGCATTTTTT CAAACAGCCG TTGCATGAAT TATTCAGGGA AAGTATTTCA CTGGATAACT TTATGTTTCA ATCCGAATTG TTGATTCTGG AAGCACAGCT GGGTGAATCG AAAACAGACC TTGAGCGGAT CTCCGTTGTA GAACGGTTTT TACTTTCAAA AATCCGTAGT ATTGAACCGG ATAAACTAGT ATTGGCAGCC CTTGCACTTA TTCATAAAAG CAAAGGCATG ATCCGTATCA CAGAATTGAT GGCGCAGTTA CACATCAGTC AAAGCCCGTT GGAAAAGAGA TTCAGGCAGG CAGTAGGCGC ATCACCTAAA AAGTTTTCTT CCATTGTGCG GCTAAAACAT GCTATTCAGC AGCAGACGCA TTCAAACTCC CTTACTGAAT TAAGTTACGA ACTGGGCTTT TACGATCAGG CACATTTTAT CAAAGAGTTC AAAAAATTTA CCGGAGATAC ACCAGAGATT TTTTTTTCTT CTCAAAATTC GTAA
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Protein sequence | MAGFSVYIPC DALKPFVKSL AISENEHEQV YKVIPDTALV LGFQYKGKLA YLDGSNELPL ARSGVSGLSD HYKIFKNSAG IGTVLVFFTE TGAAHFFKQP LHELFRESIS LDNFMFQSEL LILEAQLGES KTDLERISVV ERFLLSKIRS IEPDKLVLAA LALIHKSKGM IRITELMAQL HISQSPLEKR FRQAVGASPK KFSSIVRLKH AIQQQTHSNS LTELSYELGF YDQAHFIKEF KKFTGDTPEI FFSSQNS
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