| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_3787 |
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| Symbol | xylR |
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| ID | 4184123 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 4379383 |
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| End bp | 4380348 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638073773 |
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| Product | transcriptional regulator |
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| Protein accession | YP_680362 |
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| Protein GI | 110640152 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.113221 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAACACG TGTCTATTTT AGTTCTTGAA ACTGCTGTGC CTGCTGCTAT TGTAGATCCG
CGGTATATGT TCAGTGCCAT AAACGACTTT TTAAAGATTG CTGAGTTGCA ACCGGCCTTT
TCAGTAAACC TTGTGGGGCT GAATAAAGAA GTAACCCTTC AGGATGGGCT CATTTCTATT
CATACAGATG CGACAATAAA AGATATAAAA AAAACAGATC TCATCATTAT CCCAGCCTTA
AGCGGTAATA TGCAGGAGGC AATAAAAAAG AACAGCGCTT ACCTGCCATG GATCACAGAG
CACTATAAAA AAGGTACAGA AGTTGCGAGC TTATGTGTCG GTGCATTCCT GCTTGCTTCA
ACGGGTATAT TAAAAGGTAA GAGCTGTTCC ACGCACTGGT TGTTTGCGAA TGAATTCCGG
ACCATGTTTC CTGACGTTAC GCTTACGGAT GATAAGATTA TCACCGATCA GAATGGCATC
TATTCCAGCG GCGGTGCTAC CTCATACTGG AACCTGCTGT TATATCTGGT AGAAAAATAT
ACCAACCGCG AAATGGCCAT TATGGCATCG AAATTTTTTT TGCTTGAAAT GGATCGCAAT
ACGCAGTCGC AGTTTGTCAT GTTTAAAGGA CAAAAAGATC ACGACGACCT GCCGATCATT
AAAGCGCAGG AATTTATTGA AAAACATTTT GCAGAAAAAA TAACCGTTGA CGAACTGGCA
GAAAAATTTG GTATAGGGCG CAGAACGTTT GAGCGGCGAT TCAAAAAAGC AACCACAAAT
ACAGTTATTG AATACATTCA GCGTGTAAAA ATTGAAGCAG CTAAAAAGCA ATTGGAATCC
GGCCGGAAAA CGGTGAACGA AGTGATGTAC GACGTTGGCT ATACCGATGT GAAAGCGTTT
AGAGATGTGT TTAAAAAGGT AGCAGGTATG TCGCCGGTGG ATTACAGGAA TAAGTATAAC
AAATAG
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| Protein sequence | MKHVSILVLE TAVPAAIVDP RYMFSAINDF LKIAELQPAF SVNLVGLNKE VTLQDGLISI
HTDATIKDIK KTDLIIIPAL SGNMQEAIKK NSAYLPWITE HYKKGTEVAS LCVGAFLLAS
TGILKGKSCS THWLFANEFR TMFPDVTLTD DKIITDQNGI YSSGGATSYW NLLLYLVEKY
TNREMAIMAS KFFLLEMDRN TQSQFVMFKG QKDHDDLPII KAQEFIEKHF AEKITVDELA
EKFGIGRRTF ERRFKKATTN TVIEYIQRVK IEAAKKQLES GRKTVNEVMY DVGYTDVKAF
RDVFKKVAGM SPVDYRNKYN K
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