| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_3777 |
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| Symbol | gltD |
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| ID | 4183799 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 4369988 |
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| End bp | 4371490 |
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| Gene Length | 1503 bp |
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| Protein Length | 500 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638073763 |
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| Product | glutamate synthase subunit beta |
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| Protein accession | YP_680352 |
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| Protein GI | 161712042 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
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| TIGRFAM ID | [TIGR01317] glutamate synthases, NADH/NADPH, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTAAAC CAACGGGATT CATGGAATTC GGCAGAGAAT TGCCAGGAAA AAGAGATCCG
CAAGCACGTC TTAAAGACTA CAAAGAACTC TATTTAGATT TCTCTGCTAC ACAAATAAAA
AATCAGGCGG CACGCTGCAT GAACTGCGGT GTACCGTTCT GTCACAGCGG TTGTCCGCTG
GGTAACATCA TACCTGAATT CAACGATGCG GTATACAGAA ACGATTGGGA AGAAGCTGCA
GAGATCTTAT TCTCTACAAA CAACTTCCCT GAGTTTACAG GAAGAATCTG TCCTGCGCCG
TGTGAAGCAT CTTGCGTGCT TGGTATCAAC AAACCTCCGG TAACGATTGA AAACATCGAG
AAGAGCATTG TTGAAACAGC ATTTGAAAAA GGTATCTTAA AACCAAACCC TCCTAAGAAA
CGCACAGGTA AAACGGTTGC GGTTGTAGGT TCAGGTCCTG CAGGCTTAGC TGCTGCGGCT
CAATTGAACA GCGCCGGTCA TACGGTAACG GTATTCGAAC GTGCCGATCA GGTAGGTGGT
TTGTTGCGCT ACGGTATTCC GGATTTCAAA TTAGAGAAAT GGGTAATCGA CCGTCGTGTA
AAATTGATGG AAGAAGAAGG CGTAATCTTC AAAACGAATA CAAACGTTGG TGTTACAGTA
AAAGCAAAAG ATATCGTTAA AGAATTTGAT GCAGTTGTAT TAACAGGCGG TTCAACAGTT
GGTCGTGATT TGCCGATCCC GGGAAGACAA TTCAAGGGCG TGCATTTTGC GATGGAATTT
TTGAGTCAGC AGAACAAACG CGTTGCTAAC ATCAAACCTG AAATTGATCA TACAGGCGAA
GCCTATAAAA ACGGCGATTT ATTAGCTACC GCTAAAAACG TAGTTGTAAT CGGTGGGGGT
GATACAGGTT CAGATTGTGT GGGTACTTCA AACCGTCATG GTGCGAAGAG TGTATTGCAA
TTTGAATTGA TGCCAAAACC ACCTGAAAAT AAAAACGAAA CAACGCCATG GCCAAACTGG
CCGATGATCC TGCGTACATC TACTTCACAC GAAGAAGGTT GCGATCGTTT GTGGTCAATC
ACTACAAAAG AATTCATCGG TGATGCAGAC GGGAACTTAA CAGGATTAAA AATTGCTGAG
ATGGGCTGGG TAACTGCACC GGACAGCAAG CTTCCGAAGT ACCAGGAATT ACCGGGTACA
GAGCGTGTTA TTCCATGTGA GTTGACATTG CTGGCAATGG GTTTCTTACA TCCGCAGCAT
GCTGGCATGC TGAATGAATT GGGTGTAGAA TACGATGAGC GCGGCAACAT CAAAGCAAAT
GGAAAATATC AGACAAACGT AGATAAAGTA TTTACGGCAG GTGATATGCG CAGAGGTCAG
TCACTGGTCG TTTGGGCAAT CTCAGAAGGC CGTGAAGCAG CACGTAATGT AGATATTTTC
TTAATGGGTA CTACTAGCCT TGAAGCAAAA GATCACGGTA TGCTGGATAC GGTCTACGCA
TAA
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| Protein sequence | MGKPTGFMEF GRELPGKRDP QARLKDYKEL YLDFSATQIK NQAARCMNCG VPFCHSGCPL
GNIIPEFNDA VYRNDWEEAA EILFSTNNFP EFTGRICPAP CEASCVLGIN KPPVTIENIE
KSIVETAFEK GILKPNPPKK RTGKTVAVVG SGPAGLAAAA QLNSAGHTVT VFERADQVGG
LLRYGIPDFK LEKWVIDRRV KLMEEEGVIF KTNTNVGVTV KAKDIVKEFD AVVLTGGSTV
GRDLPIPGRQ FKGVHFAMEF LSQQNKRVAN IKPEIDHTGE AYKNGDLLAT AKNVVVIGGG
DTGSDCVGTS NRHGAKSVLQ FELMPKPPEN KNETTPWPNW PMILRTSTSH EEGCDRLWSI
TTKEFIGDAD GNLTGLKIAE MGWVTAPDSK LPKYQELPGT ERVIPCELTL LAMGFLHPQH
AGMLNELGVE YDERGNIKAN GKYQTNVDKV FTAGDMRRGQ SLVVWAISEG REAARNVDIF
LMGTTSLEAK DHGMLDTVYA
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