Gene CHU_3757 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3757 
Symbol 
ID4186731 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp4347471 
End bp4348850 
Gene Length1380 bp 
Protein Length459 aa 
Translation table11 
GC content38% 
IMG OID638073744 
Productiron uptake protein 
Protein accessionYP_680333 
Protein GI110640123 
COG category[S] Function unknown 
COG ID[COG3182] Uncharacterized iron-regulated membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.251046 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAACA AAAAGAATTC CTATACATTC AGAAAATTCA TAAATGATGC CCATTTGTGG 
TTAGGTATAC CCAGCGGCAT TATTCTTTTT GTAATTTGTT TAACGGGTAC TATGTATACA
TTCAGCAGAG AAATTACAGA ATGGGTAGAT CGTGATAAGT TTGTCATATC TGTTGACGCA
GATGCAAAAC CTTTACCATT AAAAAATCTG ATTACATCAC TGGAAAAGCA GCACAGAGGG
TTAAAAGTTA CCGGCATTTC AATTCCCGAA GAACAAGATA AAGCCTGGAT GTTTACACTG
ATGCCTAAAG ATATGGCAGG CAAAGGTGAA AAAGTAAAAG ACGATAAAGG CAAAGATGCT
GCTAAAAGAC CGCAAGGCGA CAAAAGAAAA GAGGGATCTA AAAACGTTAA AGAAAAAGAT
TCAAAAGAAG CAAAACCAAA AAAGTTTGAT CGTTCAAAAA TTAAAAACTA TCTCGTAAAT
CCCTATACAG GAGCAGTTAC CGGAGATGCA AAAACACCTT CATCCAAATT TTTTCAGACC
ATTATGGGTT TGCATCGTTG GTTGTTGCTG GATACTGAAA CCGGCCGTCC CATAACAGGT
ATCTCTACCT TGATTTTTAT TGTGCTTGAA ATAACAGGTC TTATATTATG GCTGCCGGGA
AAAATTAAGA GCTGGTCTAA ATGGAATGCC TGGAAACAAG GTTTCAAATT AAAATTATCC
GGCGGATGGA AGCGCATTAA CTATGACCTG CACAACACAC TTGGATTTTA CACGTTGTTG
CTTGTAACCA TTATGGCTAT AACAGGTTTG TGTTTTTCCT TCGAGTGGTT CAGAGAAGGG
GTTGGTACAG TATTAGGATC AAAAGTTTTT CCTAAAGAAG AACCGGTTTT ATCAACGTTT
GTTGCAGGTG CAAAATTTGA TCTGGATAGC GCCATAAACA AAGCAAACAG CACGTTCTCA
TATGCGGGTA ATCTCAGAAT TAATCTTCCA AGAGATTCAA CAGCTTCTTT AAATTTAAGT
AAAACGACAA ACGGATTTTT TACCTCTGCA GGTTCAGACA GGATACTGAT GGATCAGTAT
TCCGGAGCAG TGTTAAAAAC GGATCGTTTC TCCGATAAAA AATTAGGGGC TCAGATTGCC
GCATTGATTT ACCCCATACA TGTCGGTGAA ATATTCGGTA CATCTACAAA AATTATTTAT
TTCATTATAT GCCTTATTGC TACCAGCCTT CCTGTAACGG GCACTATGAT CTGGATCAAT
AAATTCAATA AGAAACCGGC CAAAGAAAAA CTAAAAACAC CAAAGAAAAC GGCATCAGAA
AAAAACGTGC AGCGTCCAGT CATTATGAAG CAAACACCAT CCATAAATAC GAACGCATAA
 
Protein sequence
MANKKNSYTF RKFINDAHLW LGIPSGIILF VICLTGTMYT FSREITEWVD RDKFVISVDA 
DAKPLPLKNL ITSLEKQHRG LKVTGISIPE EQDKAWMFTL MPKDMAGKGE KVKDDKGKDA
AKRPQGDKRK EGSKNVKEKD SKEAKPKKFD RSKIKNYLVN PYTGAVTGDA KTPSSKFFQT
IMGLHRWLLL DTETGRPITG ISTLIFIVLE ITGLILWLPG KIKSWSKWNA WKQGFKLKLS
GGWKRINYDL HNTLGFYTLL LVTIMAITGL CFSFEWFREG VGTVLGSKVF PKEEPVLSTF
VAGAKFDLDS AINKANSTFS YAGNLRINLP RDSTASLNLS KTTNGFFTSA GSDRILMDQY
SGAVLKTDRF SDKKLGAQIA ALIYPIHVGE IFGTSTKIIY FIICLIATSL PVTGTMIWIN
KFNKKPAKEK LKTPKKTASE KNVQRPVIMK QTPSINTNA