Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_3757 |
Symbol | |
ID | 4186731 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 4347471 |
End bp | 4348850 |
Gene Length | 1380 bp |
Protein Length | 459 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 638073744 |
Product | iron uptake protein |
Protein accession | YP_680333 |
Protein GI | 110640123 |
COG category | [S] Function unknown |
COG ID | [COG3182] Uncharacterized iron-regulated membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.251046 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAACA AAAAGAATTC CTATACATTC AGAAAATTCA TAAATGATGC CCATTTGTGG TTAGGTATAC CCAGCGGCAT TATTCTTTTT GTAATTTGTT TAACGGGTAC TATGTATACA TTCAGCAGAG AAATTACAGA ATGGGTAGAT CGTGATAAGT TTGTCATATC TGTTGACGCA GATGCAAAAC CTTTACCATT AAAAAATCTG ATTACATCAC TGGAAAAGCA GCACAGAGGG TTAAAAGTTA CCGGCATTTC AATTCCCGAA GAACAAGATA AAGCCTGGAT GTTTACACTG ATGCCTAAAG ATATGGCAGG CAAAGGTGAA AAAGTAAAAG ACGATAAAGG CAAAGATGCT GCTAAAAGAC CGCAAGGCGA CAAAAGAAAA GAGGGATCTA AAAACGTTAA AGAAAAAGAT TCAAAAGAAG CAAAACCAAA AAAGTTTGAT CGTTCAAAAA TTAAAAACTA TCTCGTAAAT CCCTATACAG GAGCAGTTAC CGGAGATGCA AAAACACCTT CATCCAAATT TTTTCAGACC ATTATGGGTT TGCATCGTTG GTTGTTGCTG GATACTGAAA CCGGCCGTCC CATAACAGGT ATCTCTACCT TGATTTTTAT TGTGCTTGAA ATAACAGGTC TTATATTATG GCTGCCGGGA AAAATTAAGA GCTGGTCTAA ATGGAATGCC TGGAAACAAG GTTTCAAATT AAAATTATCC GGCGGATGGA AGCGCATTAA CTATGACCTG CACAACACAC TTGGATTTTA CACGTTGTTG CTTGTAACCA TTATGGCTAT AACAGGTTTG TGTTTTTCCT TCGAGTGGTT CAGAGAAGGG GTTGGTACAG TATTAGGATC AAAAGTTTTT CCTAAAGAAG AACCGGTTTT ATCAACGTTT GTTGCAGGTG CAAAATTTGA TCTGGATAGC GCCATAAACA AAGCAAACAG CACGTTCTCA TATGCGGGTA ATCTCAGAAT TAATCTTCCA AGAGATTCAA CAGCTTCTTT AAATTTAAGT AAAACGACAA ACGGATTTTT TACCTCTGCA GGTTCAGACA GGATACTGAT GGATCAGTAT TCCGGAGCAG TGTTAAAAAC GGATCGTTTC TCCGATAAAA AATTAGGGGC TCAGATTGCC GCATTGATTT ACCCCATACA TGTCGGTGAA ATATTCGGTA CATCTACAAA AATTATTTAT TTCATTATAT GCCTTATTGC TACCAGCCTT CCTGTAACGG GCACTATGAT CTGGATCAAT AAATTCAATA AGAAACCGGC CAAAGAAAAA CTAAAAACAC CAAAGAAAAC GGCATCAGAA AAAAACGTGC AGCGTCCAGT CATTATGAAG CAAACACCAT CCATAAATAC GAACGCATAA
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Protein sequence | MANKKNSYTF RKFINDAHLW LGIPSGIILF VICLTGTMYT FSREITEWVD RDKFVISVDA DAKPLPLKNL ITSLEKQHRG LKVTGISIPE EQDKAWMFTL MPKDMAGKGE KVKDDKGKDA AKRPQGDKRK EGSKNVKEKD SKEAKPKKFD RSKIKNYLVN PYTGAVTGDA KTPSSKFFQT IMGLHRWLLL DTETGRPITG ISTLIFIVLE ITGLILWLPG KIKSWSKWNA WKQGFKLKLS GGWKRINYDL HNTLGFYTLL LVTIMAITGL CFSFEWFREG VGTVLGSKVF PKEEPVLSTF VAGAKFDLDS AINKANSTFS YAGNLRINLP RDSTASLNLS KTTNGFFTSA GSDRILMDQY SGAVLKTDRF SDKKLGAQIA ALIYPIHVGE IFGTSTKIIY FIICLIATSL PVTGTMIWIN KFNKKPAKEK LKTPKKTASE KNVQRPVIMK QTPSINTNA
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