Gene CHU_3755 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3755 
Symbol 
ID4186729 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp4343733 
End bp4346132 
Gene Length2400 bp 
Protein Length799 aa 
Translation table11 
GC content38% 
IMG OID638073742 
ProducttonB-linked outer membrane receptor P92 
Protein accessionYP_680331 
Protein GI110640121 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1629] Outer membrane receptor proteins, mostly Fe transport 
TIGRFAM ID[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAATTTG TCAAGACATA TGTGCTGGCC GTTTTGTTTC TGTTGCATAT AGGAACAATT 
GCCCAGACAA CAACCGGTAA AGCTACCATT TCCGGACATG TAAAAGATTC ATCGGGTGTT
GAAATGCCTG GAGTTATTGT AATGCTGGAA GGTACGTCAT TCGGATCTGC CACTTCAGAA
ACGGGGCATT ATTCTATACA TCATATTCCT ACAGGCAGTT ATGTTTTAGT AACATCAACG
ATCGGATATC AGACACAAAA GCGTTCGGTT CATCTGGATG AACATCAGCA TCTGACAATA
AATATAGAGA TGAAAGCTGA TTCTGCACAG GAAGAAATTC ATATTGAAGG AAAAACCGAA
GCAGAAGAAA TTAAACGTTC TGCTTATACA GTAGATGTTA TTGATGCAAC AAAATATGCC
AATACATCTT CCGATCTGAA TCAGGTATTG AATCACACAT CCGGTGTGCG TATCCGGGAA
AGCGGCGGAG TTGGTTCAAC ATTTAATTTT TCACTGAATG GGTTTACCGG CAAGCAGGTT
AAATTTTTTA TTGATGGTGT ACCCATGGAT AATTTCGGAT CATCCTTTCA GTTAAATAAT
ATCCCGATCA ATTTAGCAGA GCGTATTGAA GTGTATAAAG GAGTAGTGCC GATCTGGCTG
GGGGCCGATG CCATGGGCGG GGCCATCAAT GTAGTGACAA GCACCAAACA GCGCACCTAT
GCAGATGTTT CGTATTCCTA CGGTTCATTC AATACACACC GTACCAGCCT CAATGCCGGT
TACATTGCGA AGTCCGGCTT CACCGTTCAA TTCAATGCAT TTCAGAATTA CTCCGATAAT
AATTACTGGG TAAATGTACG GAATGCCTCT ATACCGGGAG GTAATTATTC CGATGTGCGG
GTGAGAAGAT TTAATGACAA CTACCACAAT GAAACAGGAA TTTTCAATAT TGGTGTAGTA
GGTAAAAAAT TTGCAGATCG TCTATTATTC GGCATTACCC TTGGCCAGAA TAAGGCAGAC
ATTCAGACAG GTGCTCAGGC AGATGCTGTA TATGGTGATT TATGGAGACG AGGAAATATA
ATTATGCCGA GCATAAAATA TCAAAAGAAA AATTTATTCA TCAAAGGATT GGATCTGAAT
GTAACCGGTA ATTATAATTT CGGAAAGGAA CAGAATATTG ATACCGTAAA TCGGCGCTAT
AACTGGAAGC AGGAATTTAC AGCTAATAGT GCAGCAGGAG CTCCCGGTGG TGAGAGAGGC
CGTACACTTT ATAAATACAG CAACAATACA AGTATTGTTA CAACCAATAT AATTTATCAA
TTGAATGTAA AACATTCAAT CATGCTGAAT AATGTTTTCA GTTCCTTTAA CCGCAAAGGC
TCTAATGCCC TGGATGAAAA TAATGAAGCA AATAAGCAGC CTAAAATTAC ACAGAAAAGT
ATTATTGCCT TAGGTTACAA ATACGATTAC AATACCCGCT GGAGCACATC GGTATTTCTA
AAAGAATATA TTCAGGTAAC AACTATTTCA AGAGCACAAG AGGCTTCCGG TGGCTGGGGA
ACAACAGAAT ATGTGCGATA TAAAAATGTT TTCAAAGCCA CCGGTTATGG TTTTGCCACA
ACGTATTTTA TATATAAAAC ATTGCAGGCA AAACTTTCTT ACGAAAAAGG TCTTCGCTTG
CCCGATAACG AAGAATTATT CGGTGACCTG ATTCAGCTGG AAGGTAATGC GAATCTAAAG
CCGGAAATAA GCAATAACAT CAATGTTGGT TTAAGCTATA ATAAAGTGAT TCAGAAAAAC
CATTTCCTAT TGATGGAAGG CTACTTTATT TACCGTAATC TAAAAGATTT TATCCGTCCT
GAATTGAATA TAAATCAAAC CTATCAGGTT ATGAAAAACC AAGGAAGTGT TAAGAATACG
GGTATAAATG GAGAGGTACG GTATTCGTAT AAACGCAAAT ATAATATAGG CGCAAACTTA
AGCTATCAGA ATTTAATCAA TCATGTTCAA TATGAAGAAA ATGGCACTTC ATCAAATAAG
GAAAGTATTG TTTATCTCGA TCGAATTCCA AACATGCCTT TTTTATATGG GAATGCAGAT
GCCAGTGTAG TTTTTAAAAA AGTTGGCGGA CAAAAAAATT CGTTGAGCAT CGGATACAAT
CTCACATACG TACATTTCTA TTATTTGAAA TGGCCCAGTC AGGGGAGCAA AGACAATAAG
TTTGATATCC CAATGCAGCT ATCCCATGAC ATTAACATGG TATACACCAT GCGCGACGGG
CGGTATAACA TCGCACTAGA GTGCCGCAAC ATAGGGGATG CCAATTTATA TGACAACTTC
CGTTTACCTA AACCCGGAAG AGCATTTTAT ATCAAAGTCA GGTATTTTAT CAGTAAGTAA
 
Protein sequence
MQFVKTYVLA VLFLLHIGTI AQTTTGKATI SGHVKDSSGV EMPGVIVMLE GTSFGSATSE 
TGHYSIHHIP TGSYVLVTST IGYQTQKRSV HLDEHQHLTI NIEMKADSAQ EEIHIEGKTE
AEEIKRSAYT VDVIDATKYA NTSSDLNQVL NHTSGVRIRE SGGVGSTFNF SLNGFTGKQV
KFFIDGVPMD NFGSSFQLNN IPINLAERIE VYKGVVPIWL GADAMGGAIN VVTSTKQRTY
ADVSYSYGSF NTHRTSLNAG YIAKSGFTVQ FNAFQNYSDN NYWVNVRNAS IPGGNYSDVR
VRRFNDNYHN ETGIFNIGVV GKKFADRLLF GITLGQNKAD IQTGAQADAV YGDLWRRGNI
IMPSIKYQKK NLFIKGLDLN VTGNYNFGKE QNIDTVNRRY NWKQEFTANS AAGAPGGERG
RTLYKYSNNT SIVTTNIIYQ LNVKHSIMLN NVFSSFNRKG SNALDENNEA NKQPKITQKS
IIALGYKYDY NTRWSTSVFL KEYIQVTTIS RAQEASGGWG TTEYVRYKNV FKATGYGFAT
TYFIYKTLQA KLSYEKGLRL PDNEELFGDL IQLEGNANLK PEISNNINVG LSYNKVIQKN
HFLLMEGYFI YRNLKDFIRP ELNINQTYQV MKNQGSVKNT GINGEVRYSY KRKYNIGANL
SYQNLINHVQ YEENGTSSNK ESIVYLDRIP NMPFLYGNAD ASVVFKKVGG QKNSLSIGYN
LTYVHFYYLK WPSQGSKDNK FDIPMQLSHD INMVYTMRDG RYNIALECRN IGDANLYDNF
RLPKPGRAFY IKVRYFISK