| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_3735 |
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| Symbol | yiaD |
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| ID | 4185116 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 4315182 |
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| End bp | 4317194 |
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| Gene Length | 2013 bp |
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| Protein Length | 670 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638073722 |
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| Product | outer membrane protein |
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| Protein accession | YP_680311 |
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| Protein GI | 110640101 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAATTT TTTTAATCTT CTTTTTATTT ACCGTGCATG TGTGTCACGC ACAGCAGGAA
GTACGCTGGG CATGCAAAGT TATTGAAACA GACGAGACGT ACAGAGGTAA ATGGTTTTCA
CCGGAGCATG TCTTAGGTGT GCCGAATGTC TATCCGGGTT TTGCCGGAAG GGAAAGCGGT
TATGCATGGA TTGCAGGCTA TAACGAAAAA GGATACATCG AATACGACAC GTATGTTAAA
GTAGGCTTTT GTGATCCGAT CATTGCAAAA CAGATTGTTG TTGTAGAATC CTGTAATCCG
GGTGCCATTA CATCCATTAC CGTAATAGAA GCGAGCGGAA ATACGTCAAG AGTATACAAC
AAGAAGGCAG AGACGTGCGC GGAAAAATCA CGTGTGCTAA GCATTCCGCT GAAGCGTATC
AAGACGCCTG TTGTTGCGTT ATTGATTACC ACGTCCGGAA AAGGTTCAAA AGGATGGAAC
TACATAGACG CTATTGGCGT AGCTTCTACA GAAGAGCCGG TAGATGTATC CATTAATCTT
AGCAAGGATG TTGCACTCAT CGGAAACTCA ACACCGCTGG GCGATGAAAT CAACACAAAG
TATACGGAAT CCTATCCCAT CATTTCTTCC GATGGGGAAA TTTTATATTT TGCCCGTCTC
GGCGACCCAA AGAATATCGG GAACCCGGAA AAAACAGATA TCTGGTATTC CAACAGAACC
GCTGACGGAA AGTGGAGTCA TGCACAGAAT ATCGGGAAGC CTTTGAATAA TGAAGGACAC
AATTTTGTAA GTTCAATGAC ACCCGATGTA AATACATTAT TAATAGCAAA TACCTACAAA
CCCGATGGTT CCTCGCTGGG CGACGGCGTT TCGGTAACCA ATCATACTTC TTCAGGGTGG
GAATTACCCA CACAGGTAAA CCTGAAAGAA TTTGAAAACC TGAATCAATA CACGTCTTAT
TTTTTAGCCG CCGATGGAAA AACCATGCTG ATGGGTATTC AAATGAAAGA CTCATATGGT
GATCTGGATT TATATGTAAG CTTTAGAAAT GCAGACAAAT CCTGGACGAA GCCAATGAAC
CTGGGCAGAA CGGTAAATAC GTTTCAGTCT GAAGCAACAC CGTTTTTAGC TTCCGATGGA
AAAACATTAT ACTTCGGCTC AACAGGACAC ATGGGATATG GCGGTTATGA TATTTTTATG
AGCAAACGCT TGGATGATAC CTGGAAAAAC TGGAGCAAGC CAATTAATCT GGGCCCAAAG
ATCAATACCG ATGCCGGCGA GTTAGGATTT TCCGTGCCGG CTTCAGGAGA TGTAGCGTAC
ACGTATGCAT GGAGAAATGA AGTCTATCAT TCGGACATAT ACGTTGTTGC GTTATCACCT
TCGGTTAAAC CTGAACCGGT TACAATAATT TCCGGCCGTG TTCTTGACGC AAAAACAGGG
AAGCCACTCG GCGCAAAAAT TGAATACGAT ATTCTGGCTA CCGGTGTGAA CACAGGTATT
GCCAATTCCA ACCCAACTAC AGGCTCCTAT AAAATTGTTT TGCCCGGAGG AAATACCTAT
GGCTACAGAG CACAGGTGCC AGGCTATTTT TCCGTAAATG AAAATATAAC CATCGACGCT
AAATCAACCT ATACAGAAAT TAAAGTTGAT TTGTTGCTTG TGCCAATAGA ATCGGGCCAG
AAGGTAGAAC TGAAAAATGT GTTTTTTCAC CAAAGTACTC CCAATCTGAT TGAAACGTCC
TACCCGGAGT TAGACCGTAT GGTAGAAGTG TTAAAAACAA ATCCAACCGT ACGTATAGAA
TTAGACGGGC ATACAGATAA CCAGGGCGAT GCCGCGTTGA ATTTAGCGCT GTCTGAAAAA
CGAGTAGAAA CAGTTAAAGC GTATTTAGTG TCTAAAGGTA TTGATAATAA ACGTATTACA
ACAAGAGCTT TTGGTGGTAC CAAGCCAATC GCGCCCAATA ATACTGAAGA GAACAGAAAG
AAAAACCGAC GTGTAGAAAT AATCATTCTT TAA
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| Protein sequence | MRIFLIFFLF TVHVCHAQQE VRWACKVIET DETYRGKWFS PEHVLGVPNV YPGFAGRESG
YAWIAGYNEK GYIEYDTYVK VGFCDPIIAK QIVVVESCNP GAITSITVIE ASGNTSRVYN
KKAETCAEKS RVLSIPLKRI KTPVVALLIT TSGKGSKGWN YIDAIGVAST EEPVDVSINL
SKDVALIGNS TPLGDEINTK YTESYPIISS DGEILYFARL GDPKNIGNPE KTDIWYSNRT
ADGKWSHAQN IGKPLNNEGH NFVSSMTPDV NTLLIANTYK PDGSSLGDGV SVTNHTSSGW
ELPTQVNLKE FENLNQYTSY FLAADGKTML MGIQMKDSYG DLDLYVSFRN ADKSWTKPMN
LGRTVNTFQS EATPFLASDG KTLYFGSTGH MGYGGYDIFM SKRLDDTWKN WSKPINLGPK
INTDAGELGF SVPASGDVAY TYAWRNEVYH SDIYVVALSP SVKPEPVTII SGRVLDAKTG
KPLGAKIEYD ILATGVNTGI ANSNPTTGSY KIVLPGGNTY GYRAQVPGYF SVNENITIDA
KSTYTEIKVD LLLVPIESGQ KVELKNVFFH QSTPNLIETS YPELDRMVEV LKTNPTVRIE
LDGHTDNQGD AALNLALSEK RVETVKAYLV SKGIDNKRIT TRAFGGTKPI APNNTEENRK
KNRRVEIIIL
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