| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_3717 |
|---|
| Symbol | recF |
|---|
| ID | 4184495 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cytophaga hutchinsonii ATCC 33406 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008255 |
|---|
| Strand | - |
|---|
| Start bp | 4291858 |
|---|
| End bp | 4292991 |
|---|
| Gene Length | 1134 bp |
|---|
| Protein Length | 377 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 638073704 |
|---|
| Product | DNA replication and repair protein |
|---|
| Protein accession | YP_680293 |
|---|
| Protein GI | 110640083 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1195] Recombinational DNA repair ATPase (RecF pathway) |
|---|
| TIGRFAM ID | [TIGR00611] recF protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.329241 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTATATTG AAAAGATAAG TCTGCTAAAT TTCAAGAACT ACCCCGAGTT GGAACTGTCT
TTTTCTGCCG GGATCAACTT ATTTGCAGGC TTAAATGGCA GCGGGAAGAC CAATTTGCTG
GATAGTATTT ATTGTTTGTG TTTGACTAAG AGCTTTTTAA GTACAACGGA CCAACAAACC
ATAACCACCG GCCAGGGATA TTTTTCGGCA TTGGGATGGT TTCAGGAAAA TGCAAAAGAA
TTTAAAATTC AATATGATTT TGACGGTAAA AAGAAAAGTT TCACCGTCGA CAAGAAACCC
TATGCCAAAA TATCTGAACA TATCGGCCGC TTTCCTGCGA TTGTACTTAC CCCGCATGAT
ACTGATCTGA TCCGCAACAG TTCAGAAGAC CGGAGAAGAT TTTTTGATAC ACTTTTTTCA
CAGGCAGACC ATGTATATCT GGATGCACTT ATCCGATACA ATCACTTTAT AAAACAGCGG
AATGCCTTGT TAAAACAAGC GGCAGACGGT ATGCTGGTAG ACCGTATTTT AATGGATGCC
TATGACCACA ATCTGCTGCA ATCGGGTAAA ATAATTGCTC AGAAACGCGA CGAATATCTG
AAACGGCTAC TGCCCATTTT TCAGGAATAT TATTCCTTAC TATCTCCTGA TCATGAGGCA
ACGGATATTG AGTATGAAAC AAACGTTCTG TCGGCTGATT TTGAACAGGT TTTCAAAGAT
TCCTATTCAA AAGACCTGAT TTTGCAACGT ACGAATAAAG GTGTTCATAA GGATGATTTT
AAGTTTTTGA TCAATAACGA GCCAATTAAG CACTATGGTT CGCAGGGTCA GCAAAAAACA
TTTGTAATTG CGCTTAAACT TGCCCAATAC GAACTTTTGA AAGCGTGCAC CGGTCACAAT
CCCATCTTGT TAATGGACGA TATTTTTGAT AAGCTGGACG ATTTGCGCAT CGAAAAACTC
ATTCATCTTG TTCAGAAATA CATTACTGGT CAGTTATTTA TATCTGATGC CCGCCCGGAC
AGGTCTTCCA TCTTTTTTCA GTCAAATACA AAAGATTTTC GTATGTTTAT AATTGACCGG
GGTAAAGTAG AACAGTCACC CCCTTCCCAA TCAGAACTAA ATACAGATGT ATAA
|
|---|
| Protein sequence | MYIEKISLLN FKNYPELELS FSAGINLFAG LNGSGKTNLL DSIYCLCLTK SFLSTTDQQT
ITTGQGYFSA LGWFQENAKE FKIQYDFDGK KKSFTVDKKP YAKISEHIGR FPAIVLTPHD
TDLIRNSSED RRRFFDTLFS QADHVYLDAL IRYNHFIKQR NALLKQAADG MLVDRILMDA
YDHNLLQSGK IIAQKRDEYL KRLLPIFQEY YSLLSPDHEA TDIEYETNVL SADFEQVFKD
SYSKDLILQR TNKGVHKDDF KFLINNEPIK HYGSQGQQKT FVIALKLAQY ELLKACTGHN
PILLMDDIFD KLDDLRIEKL IHLVQKYITG QLFISDARPD RSSIFFQSNT KDFRMFIIDR
GKVEQSPPSQ SELNTDV
|
|---|
| |