Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_3706 |
Symbol | prfA |
ID | 4184484 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 4278452 |
End bp | 4279531 |
Gene Length | 1080 bp |
Protein Length | 359 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 638073693 |
Product | peptide chain release factor 1 |
Protein accession | YP_680282 |
Protein GI | 110640072 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0216] Protein chain release factor A |
TIGRFAM ID | [TIGR00019] peptide chain release factor 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0488544 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTGACA AATTAGAGGC TATAAAATCC CGATTTGATG AAGTGGCAGA AGCAATTCTG GACCCGAATA TTATGTCGGA TATGAAGCGC TATGCCTCCT TAAATAAGGA ATACAAGGAG CTAAATAAAA TTGTTGAGGT TTACGCTCAA TATAAAAACA TATTGGACAA TATTGAAAGT TCTAAGAAAG TACTGAGTGT TGAAAAAGAC CCGGACTTTA GAGAAATGGC TAAAGAAGAA CTTGAAACGT TAGCTGTTCA GAAGGACGAT ATTGAATTGG TTATTAAAGA ACTTCTGATC CCGAAAGATC CTAACGACAG TAAAAACATT ATCCTTGAAA TCCGAGGTGG AACAGGTGGT GATGAAGCAT CTATATTTGC AGGTGATATC TTCCGTATGT ATCAGCGTTA TTGTGACCGC ATGGGCTGGA AGATGGAACT GATCGATGCT ACAGAAGGAA CTTCCGGTGG TTATAAAGAA ATTATCTGCG GCATCTCCGG TGAAGATGTG TACGGCAAAT TAAAATTTGA ATCCGGTGTA CACCGCGTAC AGCGTGTACC TGCAACAGAA ACACAAGGAC GGATTCACAC TTCTGCTGCA TCTGTAGCGG TATTGCCCGA AGTAGAAGAA CTGGATGTTC AGCTTAACAT GAATGATATC CGTAAAGATA CCTTCTGTTC TTCCGGACCA GGCGGACAAT CCGTTAACAC TACCTATTCT GCGATCCGTT TAACACACAT TCCTTCAGGT ACGGTTGTTC AATGCCAGGA TGAAAAATCT CAAATCAAAA ACTTTGAGAA AGCGTTGAAA GTACTTCGTT CCCGTATCTA TGAGATTGAA TACAAAAAAC AACAGGATGA GTTGGGTAAA GAACGTAACT CAATGATCGG GAGCGGTGAC CGTTCTGATA AGATCCGCAC ATACAATTAC CCGCAGAGCC GCGTAACCGA TCATCGCATC GGGCATACGG TTCACAATCT GCCAGCTGTA ATGGATGGTA ATATTGATGA TTTTATTGAA GAACTCCGAT TGGCAGAAAA TGCCGAGCGT TTAAAAGAAG GCGCTCAGGA AACTGCTTAA
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Protein sequence | MVDKLEAIKS RFDEVAEAIL DPNIMSDMKR YASLNKEYKE LNKIVEVYAQ YKNILDNIES SKKVLSVEKD PDFREMAKEE LETLAVQKDD IELVIKELLI PKDPNDSKNI ILEIRGGTGG DEASIFAGDI FRMYQRYCDR MGWKMELIDA TEGTSGGYKE IICGISGEDV YGKLKFESGV HRVQRVPATE TQGRIHTSAA SVAVLPEVEE LDVQLNMNDI RKDTFCSSGP GGQSVNTTYS AIRLTHIPSG TVVQCQDEKS QIKNFEKALK VLRSRIYEIE YKKQQDELGK ERNSMIGSGD RSDKIRTYNY PQSRVTDHRI GHTVHNLPAV MDGNIDDFIE ELRLAENAER LKEGAQETA
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