| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_3689 |
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| Symbol | cafA |
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| ID | 4186411 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 4260654 |
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| End bp | 4262261 |
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| Gene Length | 1608 bp |
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| Protein Length | 535 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638073676 |
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| Product | ribonuclease G |
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| Protein accession | YP_680265 |
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| Protein GI | 110640055 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1530] Ribonucleases G and E |
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| TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAGCAACG AATTATTTAT AAGTTCGTCT CAAAGTGGAG ATCGCATAGC CTTAATTCAA
GAAAAAAGGC TTGTTGAATA CCAGTTTGAG GATCATACCC GTAAATTTAA TGTTGGTGAT
ATCTATTTAG GAACGGTACG CAAAGTCGTA CCCGGCCTGA ATGCAGCTTT CATAGATGTT
GGGTATGAGA AGGATGCTTT TTTGCATTAT TTTGATCTTG GTCCGAAGAT AAAATCATTG
ACTAAGTTTA CAAAGAATGC AATTACCTCA GCGTCCACAC CGGCTTTACT CAAAAAGTTT
GAGTTAGAAG CGGAAATAAA AAAAGATGGT AAAGTAAGTC AGGTACTGGA AAAAGGGAAT
CCGATATTGG TTCAGGTTGT TAAAGAACCT ATATCAACAA AGGGCCCGCG ACTATCTTGC
GAAATTTCGC TTGCTGGGCG TTATTTAGTT CTGGTACCTT TCTCAAATGT AGTTTCTGTT
TCCAAGAAAA TTACAGATAA AGAAGAACGC CAGCGTCTGG TGCGTTTAAT CTCTTCTATT
CGTCCGGAAA ACTTTGGCGT TATTATACGT ACTGTTGCCT CGAATAAAGA AGTTGCTGAA
CTGGACAAGG ATCTTCGAAA TCTTGTAAAA ACCTGGGAAG ATGGTATTGC TATACTAAAA
AAAGCAAGGC CAAGAGACTT GATTATAGGC GAACTGGACC GTACTTCTTC TATCTTAAGA
GATATGTTGA ACGAGAGTTT CGACAGCATC AACGTAGATA CAAAAGAGCT ATACGACGAT
CTTCGTTCCT ATATTAAAAA TATTGCGCCT GATAAGGAGC GTCTGGTAAA ACTGCACCAG
GGCAAAACCA AAATGTTTGA ATCTACAGGG GTTGAAAAAC AGCTGAAGAC CTTATTTGGC
AAGTCTGTTA GTTTATCGGG TGGCGGTTAT TTGATTATTG AACACACGGA AGCGTTGCAT
GTTATTGATG TAAACAGTGG AAACAAATCA AACAACGAAA CCAGTCAGGA AGAAACCGCG
TTGCATACAA ACCTTGAAGC CTGCCGCGAA GTAGCTCGCC AGTTAAGGCT TAGAGATATG
GGCGGAATTA TTGTTGTGGA TTTCATCGAT ATGAAAAATC TCGATAACCG CAAGGTAATA
TACGAACGTA TGAAATTGGA AATGAAAGAC GATCGTTCTA AAAACGTTAT TCTTCCATTA
TCTAAATTTG GTTTGATGCA GATAACCAGA GAACGTGTAC GTCCGCAAAC CAACCTGATC
ACCATGGAGG TTTGCCCGAC GTGTAACGGC ACCGGGAAGA TCAGCGCAAG TATTGCGATC
ACCGATCAGA TTGAGCATAA ACTGGATTAC ATCATTACCA AGCAGAATGA GAAAAACATT
ACCCTGGTAT TGCATCCATA CATTTATGCA TACTTTACTA CAGGTTATAT TTCAAAAAGA
ACAAAGTGGT TCTTCAAATA TTTCCGCTGG GTTAAATTGC GTACCGACTC ATCACTTGGT
TTGACCGAGT TCAAATTCCT GGATGAAGGT GCTCAGAACA TTGACATGGA AAGCGAAGCT
ACGACAGAAG ATTACAGAAG CGAAGAATAC ATCACTTCAG AAAAATAA
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| Protein sequence | MSNELFISSS QSGDRIALIQ EKRLVEYQFE DHTRKFNVGD IYLGTVRKVV PGLNAAFIDV
GYEKDAFLHY FDLGPKIKSL TKFTKNAITS ASTPALLKKF ELEAEIKKDG KVSQVLEKGN
PILVQVVKEP ISTKGPRLSC EISLAGRYLV LVPFSNVVSV SKKITDKEER QRLVRLISSI
RPENFGVIIR TVASNKEVAE LDKDLRNLVK TWEDGIAILK KARPRDLIIG ELDRTSSILR
DMLNESFDSI NVDTKELYDD LRSYIKNIAP DKERLVKLHQ GKTKMFESTG VEKQLKTLFG
KSVSLSGGGY LIIEHTEALH VIDVNSGNKS NNETSQEETA LHTNLEACRE VARQLRLRDM
GGIIVVDFID MKNLDNRKVI YERMKLEMKD DRSKNVILPL SKFGLMQITR ERVRPQTNLI
TMEVCPTCNG TGKISASIAI TDQIEHKLDY IITKQNEKNI TLVLHPYIYA YFTTGYISKR
TKWFFKYFRW VKLRTDSSLG LTEFKFLDEG AQNIDMESEA TTEDYRSEEY ITSEK
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