Gene CHU_3676 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3676 
SymbolileS 
ID4184649 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp4246135 
End bp4249467 
Gene Length3333 bp 
Protein Length1110 aa 
Translation table11 
GC content43% 
IMG OID638073663 
Productisoleucyl-tRNA synthetase 
Protein accessionYP_680252 
Protein GI110640042 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0060] Isoleucyl-tRNA synthetase 
TIGRFAM ID[TIGR00392] isoleucyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGTATA ACGAAAAGAA AACAGAACTG TCTGAAGTTG GAAAGGAAGT ACAACAGTTT 
TGGAATGATA AAAAAATATT TGAAAAGTCT GTAGAGACAC GTGAAGGCAA TCCAACATTC
ACGTTCTACG AAGGTCCGCC ATCTGCAAAC GGCACGCCTG GTATTCACCA TGTGATGGGC
CGTACGGTGA AGGATATTTT CTGCCGGTTT AAAACCATGC AGGGCTTTCA GGTAAAACGC
AAGGGCGGCT GGGATACACA CGGCCTGCCT GTTGAATTGC AGGTTGAGAA AGAACTTGGT
ATTACCAAAG AAGATATCGG GAAGAAAATT ACGGTAGAGC AGTATAATCA AAAGTGCCGC
GAAGCGGTAA TGAAATACAA ATCGCAGTGG GATGAACTTA CCGTGAAGAT GGGTTATTGG
GTTGATCTTG AAAAGCCATA CATCACGTTT GAGAACAACT ATATTGAATC GGTTTGGTAC
CTGTTAAAAG AATTTCATCA GAAAAAACTT TTATATAAAG GCTACACGAT CCAGCCGTAT
TCGCCTGCTG CAGGTACAGG TTTGAGTTCA CACGAATTAA ACCAGCCGGG TACATACAAA
GATGTGCGCG ACACAAGTGC GGTAGCACAA TTCAAGCTGA AAGCAAATCC GAAGTTTGCA
GACAACACCT ATTTCCTTGC ATGGACAACA ACACCATGGA CATTGCCTTC TAACAGTGCA
TTGGCTGTAG GAGAGAATAT TGAATATGTA TTGGTTTCAA CATTTAACCC ATACACGTTT
AAGCCCGTTC AGGTAATTCT TGCGAAAGCC TTGCTCGGAA AATATTTTTC TGAAAAAGCG
AAAGACCTTT CTTTAGAAGC ATATAAAGAT GGAGACAAAC TGATTCCCTT TAAAATACTT
CAAAGCTATA AAGGTAAAGA TCTTGTTGGC ATTGAATACG AACAGCTGAT GCCGTACCTG
CAGCCTGAAA CACCGGCGTT CCGTGTAATC GCGGGCGACT TTGTAAGTAC GGAAGATGGT
ACAGGTATTG TACACATTGC GCCTACCTTT GGTGCAGACG ATGCGCGTGT AGCTAAACTT
GCCGGCATTC CTTCGATCGT TACAAAAGAT GACCGCGGAA ACGAATATCC ATTGGTTGAT
AAGCGCGGCA GGTTTACTAA AGAAGTAACG GACTTCGCAG GCGAATATGT AAAAGAAGCG
TACCTAACCG ATGAAGAAAA AGAAGCGGAA CGTGTTAAAC AAGGCAGAGA TAAATACCTG
AGTGTGGATG AACGTATTTC AATTAAATTG AAAGAAGCGA ACCGTGCATT CAAGGTTGAA
AAATACGAAC ACAGTTATCC GCATTGCTGG AGAACAGATA AGCCGGTGCT TTATTATCCA
TTGGATTCCT GGTTCATCAA AACAACAGCA AAAAAAGAAC GTCTGGTTGA ACTGAATAAA
ACCATTAACT GGAAACCTGA ATCTACAGGC GTTGGTCGCT TCGGCAACTG GCTGGAAAAT
CTGGTTGACT GGAACCTTTC GCGTTCTCGC TATTGGGGAA CACCGCTGCC GATCTGGCGT
TCAGAAGATG GCTCTGAAGA GAAATGCATC GGTTCGATTG AAGAATTGAA AACTGAAATT
GCAAAAGCAC AAAAAGCAGG CATCGAAACG GCAACAGATA TTAAAGATTT ACACAGGCCA
TACGTAGATA ACATTGTTCT GGTAAGTGAT TCCGGCAAGC CGATGAAACG CGAGCTGGAC
CTGATCGACG TGTGGTTTGA TTCCGGTGCG ATGCCGTATG CGCAGTGGCA TTACCCGTTT
GAAAATAAAG AATTATTCAA CAATAATTAT CCGGCAGACT TTATTGCAGA AGGTGTGGAT
CAGACACGTG GCTGGTTCTT TACATTGCAC GCAATCTCCG GCATGCTGTA TGATAAAGTT
GCATTCAAAA ATGTAATTGC AAACGGATTG GTACTGGACA AGAATGGAAA CAAAATGTCT
AAGCGTGTAG GCAATGTAGT GAACCCGTTT GAAACGATTG ATAAATATGG GCCGGACGCA
ACACGCTGGT ATATGATTAC CAATGCACCG CCATGGGACA ATTTGAAATT CAATTTAGAC
GGTATCACCG AAGTGCAGCG CCGTTTCTTT GGTACGCTTC AGAATACCTA TTCATTCTTT
GCCTTGTATG CGAACTTAGA TAATTTCACG TTTGCTGAAG CAGAGATTCC ATTGGCACAA
CGTACCGAAA GCGATCGCTG GATCTTATCG AAACTGCAAT CACTGGTTAA AGATGTTGCA
GATGCATACA GTGATTACGA GCCGACGAAA GCCGGGCGTG CGATACAGGA TTTTGTAGTT
GATGATTTGA GTAACTGGTA TGTACGTCTG AATAGAAAAC GTTTCTGGAA AGGCGAATAC
AATGCAGATA AAACCGCTGC GTATCAGACA TTATATACCT GTCTGGAAAC GGTTGCCAAA
TTAGGTGCGC CGATTGCTCC GTTTTACATG GATAAATTAT TCAGCGACTT AAATCAGGTC
AGTAAAAAGA ATGCTGTTGA ATCTGTTCAC TTAGCCGATT TTCCGAAAGT GAATGAAGCG
TTTTTAGACG TAGAACTGGA AGAACGTATG AGCCTGGCTC AACGCATCTC TTCGCTGGTA
CACTCGATCC GCAAGGCACA AACGATTAAG GTTCGTCAGC CGCTTTCCAG AATTCTCATC
CCGATCTTAC AGCCGCATCT GAAAGCACAG ATCCAGGCGG TAGAAGATCT GATTAAAAAT
GAAGTGAATA TCAAAGCAGT TGAATATATT GAGGATACTT CCGGCGTTGT TATTAAAACG
ATCAAACCTA ATTTTAAAAA ATTAGGAAAA GAATACGGCG CGAAACTGAA AGAGATCGGC
AATGCAATTG CTGAATTGCG TGCAGAAGAT ATTACTGCCA TTGAACGCAA TGTCTTTGAA
CTGAAACTTG CAGACGGCAC CGTTATCCCG ATTACGTCAG AAGATGTTGA GATCCGTTCT
CAGGATATTC CTGGCTGGTC CGTTGCTTCT GAAGGCGGCA TCACTGTTGC GCTGGATATT
ACGTTAAGCG ACGACCTTCG TAAAGAAGGG ATTGCGCGTG ATGTTGTAAA CCGTGTACAG
AATCTGCGTA AAGACATGGG CCTTGAAGTA CAGGATAAGA TCCGTATCAC CATTCAGAAG
GTAGACGAAT TGATCAATAG TGCATTAAGT GCAAATCAGG AATACATTTG TACAGAGACA
CAAGCCTTCT CCTTAGAGCT GGTAGAAAAA CTGGCAGATG GCAAAGAAGT AGAAATGGAT
GAGCAAACGC TGATCATGAA AATAGAAAAA TAA
 
Protein sequence
MKYNEKKTEL SEVGKEVQQF WNDKKIFEKS VETREGNPTF TFYEGPPSAN GTPGIHHVMG 
RTVKDIFCRF KTMQGFQVKR KGGWDTHGLP VELQVEKELG ITKEDIGKKI TVEQYNQKCR
EAVMKYKSQW DELTVKMGYW VDLEKPYITF ENNYIESVWY LLKEFHQKKL LYKGYTIQPY
SPAAGTGLSS HELNQPGTYK DVRDTSAVAQ FKLKANPKFA DNTYFLAWTT TPWTLPSNSA
LAVGENIEYV LVSTFNPYTF KPVQVILAKA LLGKYFSEKA KDLSLEAYKD GDKLIPFKIL
QSYKGKDLVG IEYEQLMPYL QPETPAFRVI AGDFVSTEDG TGIVHIAPTF GADDARVAKL
AGIPSIVTKD DRGNEYPLVD KRGRFTKEVT DFAGEYVKEA YLTDEEKEAE RVKQGRDKYL
SVDERISIKL KEANRAFKVE KYEHSYPHCW RTDKPVLYYP LDSWFIKTTA KKERLVELNK
TINWKPESTG VGRFGNWLEN LVDWNLSRSR YWGTPLPIWR SEDGSEEKCI GSIEELKTEI
AKAQKAGIET ATDIKDLHRP YVDNIVLVSD SGKPMKRELD LIDVWFDSGA MPYAQWHYPF
ENKELFNNNY PADFIAEGVD QTRGWFFTLH AISGMLYDKV AFKNVIANGL VLDKNGNKMS
KRVGNVVNPF ETIDKYGPDA TRWYMITNAP PWDNLKFNLD GITEVQRRFF GTLQNTYSFF
ALYANLDNFT FAEAEIPLAQ RTESDRWILS KLQSLVKDVA DAYSDYEPTK AGRAIQDFVV
DDLSNWYVRL NRKRFWKGEY NADKTAAYQT LYTCLETVAK LGAPIAPFYM DKLFSDLNQV
SKKNAVESVH LADFPKVNEA FLDVELEERM SLAQRISSLV HSIRKAQTIK VRQPLSRILI
PILQPHLKAQ IQAVEDLIKN EVNIKAVEYI EDTSGVVIKT IKPNFKKLGK EYGAKLKEIG
NAIAELRAED ITAIERNVFE LKLADGTVIP ITSEDVEIRS QDIPGWSVAS EGGITVALDI
TLSDDLRKEG IARDVVNRVQ NLRKDMGLEV QDKIRITIQK VDELINSALS ANQEYICTET
QAFSLELVEK LADGKEVEMD EQTLIMKIEK