Gene CHU_3672 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3672 
Symbol 
ID4184645 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp4240871 
End bp4241806 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content44% 
IMG OID638073659 
Product2-nitropropane dioxygenase 
Protein accessionYP_680248 
Protein GI110640038 
COG category[R] General function prediction only 
COG ID[COG2070] Dioxygenases related to 2-nitropropane dioxygenase 
TIGRFAM ID[TIGR03151] putative enoyl-(acyl-carrier-protein) reductase II 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAACA GAATCACACA ACTCTTCAAC ATTCAATATC CCATTATACA GGCTGGAATG 
GTTTGGTGCA GCGGCTGGCG TTTGGCTTCA GCTGTAAGCA ATGCAGGCGG ACTTGGTTTG
ATCGGTGCAG GTTCTATGTC GGCAGATCTG CTGCGCGAAC ATATTCAGAA ATGCATAACT
GCGACCAGCA AACCATTTGG TGTAAATTTA CCCTTATTGT ATGCGCACAT CGATCAGCAT
ATTCAGGTGT TGCTGGATGA AAAAGTAAAA ATTGTTTTTA CTTCCGCAGG CAATCCGGCT
ACCTATACAG CAAGATTAAA AGAAGCAGGT ATAACGGTTG TGCATGTAGT ATCAAGTACA
AAGTTTGCTT TGAAAGCACA ACAGGCTGGC GTTGATGCTA TTGTTGCAGA AGGTTTTGAA
GCGGGTGGGC ATAATGGAAG AGAAGAAACA ACTACCTTAT GTCTGATCCC ATCTGTAGCA
GATGCAGTAA GTATTCCGGT TATTGCTGCT GGCGGCATTG CTTCCGGGCG TGCGATGCTT
GCAGCATTTG CCTTAGGAGC AGAAGGTGTA CAGGTCGGTT CTGCTTTTGC TGTAAGCGAA
GAATCTTCCG CGCACCATAT ATTTAAACAA CGCGTGGTTG AAGCCCTTGA AGGTGAAACA
ATCTTAACCT TGAAACAGCT GACACCTGTG CGGTTAATAA AAAACAATTT TTATGAACAG
ATAAAAAAAG CAGAAACGAA TGGTGCTTCA GCAGAAGATC TGAAAAATAT AGTAAGCAAA
GGAAGGTCGA AGAAAGGAAT TTTTGAAGGC GATCTCAACG AAGGCGAATT AGAGATCGGG
CAAGTGAGCG CGCAGCTGAA AGCCGTGAAG CCTGCAGCAT CTGTAATAAC GGATATCTGG
GAAGAGTTTG AGCAGGCACG GAAAAATATT TTTTAA
 
Protein sequence
MQNRITQLFN IQYPIIQAGM VWCSGWRLAS AVSNAGGLGL IGAGSMSADL LREHIQKCIT 
ATSKPFGVNL PLLYAHIDQH IQVLLDEKVK IVFTSAGNPA TYTARLKEAG ITVVHVVSST
KFALKAQQAG VDAIVAEGFE AGGHNGREET TTLCLIPSVA DAVSIPVIAA GGIASGRAML
AAFALGAEGV QVGSAFAVSE ESSAHHIFKQ RVVEALEGET ILTLKQLTPV RLIKNNFYEQ
IKKAETNGAS AEDLKNIVSK GRSKKGIFEG DLNEGELEIG QVSAQLKAVK PAASVITDIW
EEFEQARKNI F