Gene CHU_3595 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3595 
SymbolfadD 
ID4184801 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp4147479 
End bp4149242 
Gene Length1764 bp 
Protein Length587 aa 
Translation table11 
GC content42% 
IMG OID638073582 
Productlong-chain-fatty-acid--CoA ligase (acyl-CoA synthetase) 
Protein accessionYP_680171 
Protein GI110639961 
COG category[I] Lipid transport and metabolism 
COG ID[COG1022] Long-chain acyl-CoA synthetases (AMP-forming) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGTTA CACGTCTTTT CGATTTAATT CCGCAGCAGA TTGCCAAGTA TCCCAAACAA 
GATGCACTGG CAACCAAAGA GAATGGCACC TGGATTAGTT ATTCTTCTGT GCGTGTTCAA
GAAATTATTG ATAAAGTAAG TATTGGCTTT ATAAAATCGG GTTTACAAAA AGACGATAAA
GTAGCCATTA TTTCACCAAA CCGTCCGGAA TGGAATTTTA TTGATCTGGG ACTGCAACAG
ATAGGAGCGG TGAGTGTACC GATTTATCCG ACACTTACGG TGGAAGATTA CCGGTATATT
TTTGATGACG CCGAAGTTAA AATGGTTTTT GTGTATGACG AACAATTATT TGCAAAAGCA
ACAGAAGCCG TAAACGGTTC CAGAACAAAT CCTGTAATAT ATACCTTGCA GGATGTGAAC
GGAGCGAAAA GCTGGAAAGA TATCACGGCA CTGGCAGACG GCCAACCGGC TTCGATGCTT
GATCCATATA AGGCAAATGT ATTTAACGAC GATCTGCTTA CCTTGATTTA TACGTCCGGA
ACTACAGGTA AGCCCAAGGG TGTTATGCTT ACACATAACA ATATATTAAG CAATGTACTG
GCAGCGATTC CGCTGATGCC GGTTAATCAC AATCATAAAG CACTTAGTTT TTTACCGTTG
TGCCACGTGT ATGAACGCAT GTTGTGTTAT CTGTACCTGT CTCAGGGGGT ATCTATCTAT
TATGCAGAAA GTACAGATAC AGTTGGCGAA AATTTAAAAG AAGTGCAGCC GCACATGTTT
GTTACGGTGC CAAGGCTGCT TGAAAAAGTA TACGATAAAA TTGTTGCTAA GGGCGCTGAA
CTTACGGGCA TTAAAAAATT CCTCTTCTAT TGGGCACTTG AGCTGGGGTT AAAATATGAT
ATGCAGAAAA ATCAAGGCTT CTTTTATAAC ATTCAACTGA AGCTTGCCAA TAAAATAATC
TTCAGTAAAT GGCGAGAAGC ATTGGGTGGG AATGTGATTA CCGTTGTTTC AGGCGGTGCT
GCCTTACAGC CTCGTTTGGC GCGTGTTTTC TGGGCGGCGC AGATTCCGGT GATGGAAGGT
TACGGTTTAA CAGAGACGTC GCCGGTGATT GCCGTAAACA GATTCAATCC GGATGAAACA
CGAATCAGTA CTGTTGGTCC GCTGTTGCCC GGAGTAGAAG TGAAGATCGC GGAAGACGGA
GAAATCCTGA CGCGCGGACC GCATATTATG AAAGGATACT ACAAACGGCC GGATTTAACG
GCCGAAGCAA TTGACAGTGA AGGCTGGTTT CACACAGGAG ATATCGGTCA GTTTGTAGAA
AATAAATATT TAAAGATCAC CGACCGTAAA AAAGAAATGT TTAAAACCTC GGGTGGTAAG
TACATTGCAC CGCAGCTGGT TGAAAATAAA TTTAAAGAGT CGCGCTACAT TGAACAAATA
ATGGTGATTG GTGAAGGGGA GAAATTCCCT TCTGCGATTG TGGTGCCGTC GTTTGCAGAT
GTAAAAAGCT GGTGTGAGAT CAAAGGCATT CCGTATACGA CAAACGAAGA AATGGTTTGC
AATGCACAGG TGATCGAAAA ATTCCAGAAA GAGTTTGACG AAATGAATGA AAACTTTGCA
CAGTATGAAC GTGTAAAGAA ATTCATTTTA ATGCCAAGGC CATTTACGAT AGAGAGCGGA
GAAATGACAC CGACATTGAA ATTGAAACGT AAGATCATTA TGCAGAATTG CCAGGGCCAG
ATAGAGAAGA TGTATGCGAG GTAG
 
Protein sequence
MAVTRLFDLI PQQIAKYPKQ DALATKENGT WISYSSVRVQ EIIDKVSIGF IKSGLQKDDK 
VAIISPNRPE WNFIDLGLQQ IGAVSVPIYP TLTVEDYRYI FDDAEVKMVF VYDEQLFAKA
TEAVNGSRTN PVIYTLQDVN GAKSWKDITA LADGQPASML DPYKANVFND DLLTLIYTSG
TTGKPKGVML THNNILSNVL AAIPLMPVNH NHKALSFLPL CHVYERMLCY LYLSQGVSIY
YAESTDTVGE NLKEVQPHMF VTVPRLLEKV YDKIVAKGAE LTGIKKFLFY WALELGLKYD
MQKNQGFFYN IQLKLANKII FSKWREALGG NVITVVSGGA ALQPRLARVF WAAQIPVMEG
YGLTETSPVI AVNRFNPDET RISTVGPLLP GVEVKIAEDG EILTRGPHIM KGYYKRPDLT
AEAIDSEGWF HTGDIGQFVE NKYLKITDRK KEMFKTSGGK YIAPQLVENK FKESRYIEQI
MVIGEGEKFP SAIVVPSFAD VKSWCEIKGI PYTTNEEMVC NAQVIEKFQK EFDEMNENFA
QYERVKKFIL MPRPFTIESG EMTPTLKLKR KIIMQNCQGQ IEKMYAR