| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_3588 |
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| Symbol | |
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| ID | 4184794 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 4137133 |
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| End bp | 4140141 |
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| Gene Length | 3009 bp |
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| Protein Length | 1002 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 638073575 |
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| Product | DNA helicase |
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| Protein accession | YP_680164 |
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| Protein GI | 110639954 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1112] Superfamily I DNA and RNA helicases and helicase subunits |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.430381 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTGACA AAAAGATCAC CGTACTTATT GGTAAAGCCA TACGTGAAGG AAAATACCTG
AGCATTACTT ACAAAAATAA GAATGGAGAG ATTACACCTT TTTGGATAAG CATATTCGAC
ATAAATGAAA AAGATGAATT ATTGGTAAAC ATTTTTAATG TCACAAAAGA AGTCCCCATA
AGAGATGGCA AAATATATAT TTCACGTATT CAGACTGCTG AAATACTGAA ATTCTCACAC
TATGATGTTC CGGAAAAACT GAATAAAAAG TTAAATGAAG ATGAACGTTT ACAGGTATAT
GAATTTGATC GATACGACAA TAATATATTG AACTACTTCC TGGAATGTTA TAAAGCCAAT
AAAGATCCGT TTTTGTACAA AGCAATTTTA ATTCAGGGGA TAGACTTAAC GGAATTAGCA
AAGAAGAATC CATATCAGTT AACAGAGGAA CAGCAAAAAC AGATTATAAA AGATCTCTAT
CATAACGATT ACAAAAAGTA TTATGATTAC GATCTCGCCT TAAGTGAATT TTCAATTGAC
GTAAGGTCGA AGGGTAAATT TGTAATTGCA TACAGAAACC TCACCTTTGA TCCGGTACAG
AAGATATTAT ATTTAGGCAG TAAAGTCCAC TTCAATTCAA ATTTTTATAT ACAGGATAAA
AAGCATTCTT TGTCATACTA CACCGATCTG AGTGCTGAAG ATTTTGAATC GATATACATC
AAGGATAAAT CCCAGGCTGT TGAATTATTG CGGGCCAATT TCGTAACCGG CGAATTGCCA
AATACAAGGC CTGAAGTAGT GGTTTTGGGA TATGCGCAGA TAGATATATC CGGCATTTAT
GACCATATTC ATCTGGAATA TGAACATAAA AAAATGGAGG CTCCATTGCG GGCATTCTTT
CAAAACTTAT CCTTGCTCGA CAGACAAAAC CGAAAAGAAC CTCACATTGC ATTGTATGAC
CGCAATATTA ATATTGATCA GATTCAAACC ATTTACAATG CGTTAAAATA CCCCGTTACG
TATGTACAAG GTCCGCCCGG AACTGGCAAA ACACAAACAA TATTAAATAT TATTGTGAAT
TGCATTACCA ATGGAAAAAC AGTATTGATT TCATCAAATA ACAATGTACC CATTGATGGA
ATCAAAGATA AATTATACTT AGGGAAATAC AGAAACAAAG AAATTCTGTT TCCTATACTC
AGGCTCGGAA ACAACGAATG TATAGTACAG GCACTTCGTG TAATTAAAGA ACGCTATGCT
TTTGAAACAA GAGATGTGCC GAAGGAAGAG CTATTGTTTA ATCTTAAAGA AAAGTCGAAA
GAGAAAAACA GAGAATTGCT TGAGAAAATT AAAAATTATG AAACCAGAAT TGAACTGTCA
CAAAACTTAT TTTTTGTTGA CAGTCTGTTA TCAAAAGATG GGAATCACTT ACTTGAAAAA
GAAAGGCAAA CCATTGAAGG AAAACTAAAA CAGATAGCAG AGACCAACAA TGATGATCTC
GACAATTTAT ATGAAGTGAT AAAAGACAAT CCACAGCTGT TGCAATTTTT TTACTTCGAA
TCATTAAAGT ACGCAAAACG GCTGAAAACC AAGGATTATA TTTCGTTGAT AGAAATTCTG
GATATTGAAG AATCTGAAAA ACAGGTAAAA GAATTTAATA AGTGGCTTGC AGACGAGGAC
AACATGGAGA AACTTACAAA AGTGTTTCCC ATAATCCTTA CTACCAATAT ATCAAGTCGA
AAGCTGGGAC GTACATACAA ATTTGATTTA CTGGTAATGG ATGAAGCCGG ACAGTGCGAT
ATATCCACCA GTCTGATTCC AATTTCAAAA TGCAAAAACA TGGTTTTGAT TGGCGACACA
AACCAGCTAA AACCAATTGT TGTTTTTGAA GAAAGCAGAA ATCAATATTT GATGAACCAG
TTTGGAATAG AGAAGATATA CGATTACTAC AATAATTCTA TTCTCTCCGC ATATAAAAGG
ATTGATAACA TTTCGAGAGA TATTTTACTG AGCTATCATT ATCGTTGTGG AAGGAAAATT
ATTAATTATT CAAACATGCG GTTTTATGAG AACAGATTAA ACCTTTCAAA GATTAAAACG
AATGGTGCGC TGAAGCTGAT AGATGTAAAC AATGTAAACC AACAGGACAG AAATGCAACT
ATTGATGAAG CAAATGAAAT AGTAAAATAC ATCGCCGACA ATAAATTAAC GGATGTTTTC
ATCATCACAC CATTCCGTAA CCAAGAGAAA GTTTTGAATC ATTGTTTGGA ACAGGCGAAG
GCCAATGAAG AAATTGATTC TTCTGTAAGT TGCGGTACGA TTCACAAAAT ACAAGGACAA
GAGAATAAAA CCATCATCAT ATCCACTTCT CTATCAAGAA ATACAACGTC CAGCACATAC
GACTGGATAA AAAATAACAG CCAGTTAATT AATGTCGGTG TTACACGGGC ACAGGAAAAT
CTGGTTGTGG TAGTCGATAA AAAAGCAATT GATATGTTGT CAAGGAAAAA TGACGACTTG
TATGCACTGA TTGATTATGT GCAAAAAAAT GGCACTACAC AAATCCAGGA AAGTACAGCA
AATAAGTTTA CCATTGGATT TTCGAATGAT TCCAAATTTG AAGATGAATT TTATAAAACA
ATGAGCCATT ATTGCACCAT TCAGCGCGCC AGTTTTGAAA GAAATGTAAA AGTTATTACT
GTTTTTCCGG AAGAAATAAA CAATCCTGGT GTAAATAAAA AAGAATTTGA TGGAGTAATT
TTTGAAGGCA GGATTCCCAA AGTGGTATTT GAAATTAATG GCGTTGAACA TTATAAAAAT
AAAAAAAGAA TTGACTCCGA TACGATTAAG ATGCAATTAC TGATGTCTAA AAACATAGAA
AGAATTGTTA TACCCAATCA GTATGTTAAA CATTATGAAT TTATACGGGA ATTAATGAAT
AAAATCAAAG GCGGCAGTTA TCAAAAGACA TTGTTTGATG GCTATGATCC ACTATCTGTT
GACGATTAA
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| Protein sequence | MIDKKITVLI GKAIREGKYL SITYKNKNGE ITPFWISIFD INEKDELLVN IFNVTKEVPI
RDGKIYISRI QTAEILKFSH YDVPEKLNKK LNEDERLQVY EFDRYDNNIL NYFLECYKAN
KDPFLYKAIL IQGIDLTELA KKNPYQLTEE QQKQIIKDLY HNDYKKYYDY DLALSEFSID
VRSKGKFVIA YRNLTFDPVQ KILYLGSKVH FNSNFYIQDK KHSLSYYTDL SAEDFESIYI
KDKSQAVELL RANFVTGELP NTRPEVVVLG YAQIDISGIY DHIHLEYEHK KMEAPLRAFF
QNLSLLDRQN RKEPHIALYD RNINIDQIQT IYNALKYPVT YVQGPPGTGK TQTILNIIVN
CITNGKTVLI SSNNNVPIDG IKDKLYLGKY RNKEILFPIL RLGNNECIVQ ALRVIKERYA
FETRDVPKEE LLFNLKEKSK EKNRELLEKI KNYETRIELS QNLFFVDSLL SKDGNHLLEK
ERQTIEGKLK QIAETNNDDL DNLYEVIKDN PQLLQFFYFE SLKYAKRLKT KDYISLIEIL
DIEESEKQVK EFNKWLADED NMEKLTKVFP IILTTNISSR KLGRTYKFDL LVMDEAGQCD
ISTSLIPISK CKNMVLIGDT NQLKPIVVFE ESRNQYLMNQ FGIEKIYDYY NNSILSAYKR
IDNISRDILL SYHYRCGRKI INYSNMRFYE NRLNLSKIKT NGALKLIDVN NVNQQDRNAT
IDEANEIVKY IADNKLTDVF IITPFRNQEK VLNHCLEQAK ANEEIDSSVS CGTIHKIQGQ
ENKTIIISTS LSRNTTSSTY DWIKNNSQLI NVGVTRAQEN LVVVVDKKAI DMLSRKNDDL
YALIDYVQKN GTTQIQESTA NKFTIGFSND SKFEDEFYKT MSHYCTIQRA SFERNVKVIT
VFPEEINNPG VNKKEFDGVI FEGRIPKVVF EINGVEHYKN KKRIDSDTIK MQLLMSKNIE
RIVIPNQYVK HYEFIRELMN KIKGGSYQKT LFDGYDPLSV DD
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