Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_3512 |
Symbol | |
ID | 4183535 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 4065504 |
End bp | 4066121 |
Gene Length | 618 bp |
Protein Length | 205 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 638073499 |
Product | transcriptional regulator |
Protein accession | YP_680088 |
Protein GI | 110639878 |
COG category | [K] Transcription |
COG ID | [COG2808] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTATATTC CAAAGTTTTT CAAACTGGAT GATCCTGAAA AGGCGCGCGT TTTTATTGAA AAAAACAGTT TTGGTATTTT AATAAATCAG TTGGATGGCA AACATTTGGC TACGCATATT CCGCTGCTTA TTGAAACAAA CAGTAACAAT GAAACTATTT TGTCCGGACA CATAGCAAAA GCAAATAATC AATGGAAAGC TTTTCGCGAA GATCAGGAAG TACTTGTTAT TTTTCAGGGA CCTCATGCCT ACATATCTTC TTCCTGGTAT GATCATGAAA ATGTCCCAAC CTGGAATTAC ACAGCCGTAC ATGTATATGG AAAAATTAAA ATTTCAGATA ATAAAACCGT ATTTAATCAG TTGAGCAAAC TTGTTGATAC ATATGAAACT GGAAATAAAA ATCCCGTAAG TATTTCAAAA ATGTCTGCCG GTATGGTTGA AAACCAAATG AAAGCGATTG TTGGTTTTGA AATCCTCATC ACGGAGATAC AGGCTGCAGA AAAACTTTCT CAAAACAGAG ATGAAAAAAA TTACAACAAC ATTATAGCTG AACTGGAAAA GAAAGGTGAT GTGGATTCTC TGCAAGTGGC GGCGGCAATG AAAAATTTAA AACGCTAA
|
Protein sequence | MYIPKFFKLD DPEKARVFIE KNSFGILINQ LDGKHLATHI PLLIETNSNN ETILSGHIAK ANNQWKAFRE DQEVLVIFQG PHAYISSSWY DHENVPTWNY TAVHVYGKIK ISDNKTVFNQ LSKLVDTYET GNKNPVSISK MSAGMVENQM KAIVGFEILI TEIQAAEKLS QNRDEKNYNN IIAELEKKGD VDSLQVAAAM KNLKR
|
| |