Gene CHU_3502 details

Gene Information

• Locus tag: CHU_3502
• Symbol: gidA
• ID: 4183896
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Cytophaga hutchinsonii ATCC 33406
• Kingdom: Bacteria
• Replicon accession: NC_008255
• Strand: +
• Start bp: 4053395
• End bp: 4055260
• Gene Length: 1866 bp
• Protein Length: 621 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 638073489
• Product: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
• Protein accession: YP_680078
• Protein GI: 110639868
• COG category: [D] Cell cycle control, cell division, chromosome partitioning
• COG ID: [COG0445] NAD/FAD-utilizing enzyme apparently involved in cell division
• TIGRFAM ID: [TIGR00136] glucose-inhibited division protein A

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.0679695
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 13
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGTTTCCTG AATACGATGT GATTGTGGTG GGTGCCGGTC ACGCTGGTTG TGAAGCGGCT 
GCGGCTGCGG CTAATATGGG TTCTAAAGTA CTGCTTGCTA CCATGAATAT GCAGACCATA 
GCACAGATGA GCTGCAACCC TGCAATGGGT GGGGTAGCAA AAGGACAAAT TGTGCGTGAA 
ATAGATGCGC TTGGAGGTTT ATCAGGTATT GTATCTGATA AATCTATGAT CCAATTCAGA 
ATGTTAAACC GTTCAAAGGG TCCTGCTATG TGGAGTCCGC GTTCGCAAAA CGACAGACAT 
ATGTTTGCCT GGGAATGGCG TATGCAATTA GAAGCACTGC CTAACGTAGA CTTCTGGCAG 
GAGATGATCT CTGGCCTGAT TGTTAAAAAC GGGAAGGTGT GTGGCGTACG CACGGGTTTA 
GGAATAGAGA TACCTTGCAA GTCTGTTGTA CTAACCAATG GGACATTCTT AAACGGTATC 
ATACATATAG GTGAAAAGAA ACTAGGGGGT GGAAGAACGG GAGAGAAAGC AGCAACAGGT 
ATTACAGAAC AATTGGTTGA ATTGGGCTTC GAAAGCGGCA GAATGAAGAC TGGTACACCA 
CCCCGTGTAG ATGGAAGAAG TTTAGACTAC AGTGTTATGC AGGAACAGGA GGGAGATGAA 
AACCCTTCCA AGTTTTCTTA CTCTAAACAG ACAACTTCTC TTACGAAACA ACGCTCATGT 
CATATTACCT ACACCAATCA AGCTGTACAC GATACATTAA AAGAAGGTTT TGACCGTTCT 
CCGATGTTTA CAGGAAGAAT AAAAGGATTA GGGCCTAGAT ACTGTCCTTC TGTTGAAGAT 
AAGATCAACC GCTTTGCTGA GAAAGAAAGA CATCAGATCT TTGTAGAACC TGAAGGCTGG 
AATACGGTTG AAGTATATGT AAATGGTTTC TCTACTTCTT TACCAGAAGA TGTACAATAC 
AAAGCCATTC GTAAAATAGC CGGATTTGAA AATGCAAAAA TGTTCAGACC GGGTTATGCC 
ATTGAATATG ATTTCTTCCC GCCGACACAG TTGCAATTAA GCTTAGAGAC TAGATTGGTA 
AAGAACCTGT TCTTTGCAGG ACAGATAAAT GGTACTACAG GCTATGAAGA AGCAGCTTGT 
CAAGGTTTGA TGGCAGGTAT CAATGCACAT AAAGCAGCTA AAGACCACGA GGCACTTATT 
CTAAAGAGAT CTGAAGCCTA TATAGGGGTA TTGATAGACG ACTTGGTGAA TAAGGGCACA 
GAAGAGCCTT ATAGAATGTT TACGTCGCGG GCCGAATACC GGATTCTTCT CAGACAGGAT 
AATGCTGATC TAAGACTTAC TCCAATAGGA TATGAAATTG GTCTGGCAAC AGAAGAACGC 
TACCAGGATA TGCTTCTTAA GAAACACAAC AGTGAAAAAC TGGTTGAAGA AATTAAAAAC 
ACAAAGATCA AGCCTGAAAC AGCAAATGAA ATTCTCGAAG AAAATGGTTC TGCTCCGATT 
AAGGAAAAAG TAGTTCTTTA CAACCTGCTT AAACGTCCAA ACATGGAAGT TAGCCTGTTT 
GCAGAAAAAG TAGAGGAAAT AAAAACCCTG ATCGAACCAT ACACACAGGA AGAAATTGAA 
CAGGCAATGA TTGAAGTAAA ATACAGAGAT TATATTGATA AAGAGGAGCA GATGGCTCTT 
AAAATGACAC AGCTTGAAAA CATGGCTTTG AATCCTGATT TTGATTATAA AAAAATACAG 
GCATTATCAC TGGAAGCAAG GGAAAAATTA AGCAAGCTAA AACCGGCAAC ATTAGGCCAG 
GCCTCAAGAA TCAGCGGTGT TAACCCAGCT GATATTTCAA TATTAATGAT ATACATGGGA 
AGATAA 

 

Protein sequence

MFPEYDVIVV GAGHAGCEAA AAAANMGSKV LLATMNMQTI AQMSCNPAMG GVAKGQIVRE 
IDALGGLSGI VSDKSMIQFR MLNRSKGPAM WSPRSQNDRH MFAWEWRMQL EALPNVDFWQ 
EMISGLIVKN GKVCGVRTGL GIEIPCKSVV LTNGTFLNGI IHIGEKKLGG GRTGEKAATG 
ITEQLVELGF ESGRMKTGTP PRVDGRSLDY SVMQEQEGDE NPSKFSYSKQ TTSLTKQRSC 
HITYTNQAVH DTLKEGFDRS PMFTGRIKGL GPRYCPSVED KINRFAEKER HQIFVEPEGW 
NTVEVYVNGF STSLPEDVQY KAIRKIAGFE NAKMFRPGYA IEYDFFPPTQ LQLSLETRLV 
KNLFFAGQIN GTTGYEEAAC QGLMAGINAH KAAKDHEALI LKRSEAYIGV LIDDLVNKGT 
EEPYRMFTSR AEYRILLRQD NADLRLTPIG YEIGLATEER YQDMLLKKHN SEKLVEEIKN 
TKIKPETANE ILEENGSAPI KEKVVLYNLL KRPNMEVSLF AEKVEEIKTL IEPYTQEEIE 
QAMIEVKYRD YIDKEEQMAL KMTQLENMAL NPDFDYKKIQ ALSLEAREKL SKLKPATLGQ 
ASRISGVNPA DISILMIYMG R