Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_3468 |
Symbol | arcB |
ID | 4186046 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 4012351 |
End bp | 4014306 |
Gene Length | 1956 bp |
Protein Length | 651 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 638073456 |
Product | sensor histidine kinase |
Protein accession | YP_680045 |
Protein GI | 110639835 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.355091 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAGG GGGTAATTTT TATATTACTT GGGCTTTATT GCGCGATTGT TCATGCTCAG ACCAGACCAT TGATCTTAAA CGATACAGCG GAAAAGTTTG AATGGCGCAA AGGAAATTAT GCCATCTATC GGGATACTGT ACGGAACCTT CCGCTAAGCC GTATTTTAGA ACTTCAACGG GAAGGTATAT TTAAAAAAAC AACATCAGAC GCACCACGCC TGCAATCTTC CAGACAGGAC ATGTGGGCAA AGGTTATTGT TTACAACGGC AGCCTGAATC AAACAGAATG GCTGATTGAG TTATATGATT TTCATATTGA TGAATACGAT ATCTACATAC TTCAAAAAGA TTCACTTTAT GCGCATTTTA CAGGCGGTGA TTTACAACCT TTTCACAAGC GGAAAATAGA ACATAAAAAT TTTATTCATG AGATCGTATT TGAACCCCAT CAGTTATATA CGTTATTTAT ACGCATTCAT AGCAGACAAT CTGTTGCCGT TAATGGTGTA GTACGTACAT TTCCAAGTTT TTTAGAATAT TCTAATAGAG AATATCTATT TCTGGCCATT TTTTACGGCG TTATTTTATT GATGGCGGTA TATTGTGTTT GTATCTATGT ATTTACAAAA GAGAAAACGT ATATATATTT TGCTGCAAAT GTTTTGTCTG TTGCTCTTTA CAGCTTAACA AATGATGGCC TGGGTTTTCA ATACATTTGG CCCAATCATA TAAATTTTAA TGCAGAAGCG CAAAGCTTAG CGATTGCGCT GTTTTCAACA ACAGCGCTCA TGTACACAAC AGCCTTTCTG AATGTTAAAA TAGAATCAAC AAAATATTGC CTCGTGATCC GGGTAACAGC CGCTGTAAGG TTCCTGTTAT TTCTAATTGG CTTGTTATTT TACAGGCCAC TGCTTTACTT TTATCAGCTC GATCTGTTAA TCCTGATTTT TATATTTTAT ACGTCTATAG TATTTTATAA GAAAGATTTT AAAGCAGCGC GGTTTTTTAT ACTTGCTTAC ACAGCACTAT TTATAGGCTT TTCGCTGAAT TTGTCTATTG TCTTAGGTGT TGGCTTTATA CATCCGGTTA CGGTATACGG TTTGAATATT GGTATTGTCA TACAGCTGTT TCTGTTTTCA TTTGCACTTG CAGATAGGAT AAGGCTTGCC AATAAAGATA ACCGGAACAC ACAATTACAG ATCATTCATC AGCTGAAAGA AAATGAAATA CTGAAAGATA AACTCACAAA AGAGCTTGAA GATAAGGTTA AAGAACGAAC GCAGGAACTG GAGTTTAAGA ATCAACAGCT GGACGCCTTC GTTTACAAGG CTTCACACGA TATTAAAGGA CCTTTAAAAT CCATTATCGG TTTGGCCAAA TTGGGTTTGC TGGATGTACA GGATCCCAAT GCCCGGGAAT ATTTTAAGCA TATTGAAACA AGCTCTACAC GTTTGGATAA TCTGCTTCAG GATTTATTGC AGGTAGCAAA AATAAAAAAC ACCGTTATTG AATCTACCGT TATTGATTTC AAAAAAATCA TTGATACAAT AAAAGATGGG TTCAGTAATA TTGAATCGTT TGGTGAGTTT TATATTGATG TACAAATCAA ACAGGACCGC GATTTTTATT CGGATGAAAA AATGGTCTAT TCCATTTTTC AGAATTTAAT TGAAAATGCG TTTACCTACC GGGATATTAA AAAACAAAAA TCAAGTTTAT ATATCCGCAT TGAAGTTGAT AAACAAAAAT CCGTTATAGA GTTTACCGAC AATGGAATCG GGATCAATAA AGACTTAAAA GATAAAGTGT TCGATATGTT TTTCAGGGCC AGTGAAATTT CAGGCGGAAC AGGTCTGGGT CTCTATTTAG TAAAAATGGC TGTAAATAAA ATAGGTGGAA GAATACAGGT AAACACAGAA GTAAGCAAAG GCACAACTTT TACAGTAGTA ATCTGA
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Protein sequence | MKKGVIFILL GLYCAIVHAQ TRPLILNDTA EKFEWRKGNY AIYRDTVRNL PLSRILELQR EGIFKKTTSD APRLQSSRQD MWAKVIVYNG SLNQTEWLIE LYDFHIDEYD IYILQKDSLY AHFTGGDLQP FHKRKIEHKN FIHEIVFEPH QLYTLFIRIH SRQSVAVNGV VRTFPSFLEY SNREYLFLAI FYGVILLMAV YCVCIYVFTK EKTYIYFAAN VLSVALYSLT NDGLGFQYIW PNHINFNAEA QSLAIALFST TALMYTTAFL NVKIESTKYC LVIRVTAAVR FLLFLIGLLF YRPLLYFYQL DLLILIFIFY TSIVFYKKDF KAARFFILAY TALFIGFSLN LSIVLGVGFI HPVTVYGLNI GIVIQLFLFS FALADRIRLA NKDNRNTQLQ IIHQLKENEI LKDKLTKELE DKVKERTQEL EFKNQQLDAF VYKASHDIKG PLKSIIGLAK LGLLDVQDPN AREYFKHIET SSTRLDNLLQ DLLQVAKIKN TVIESTVIDF KKIIDTIKDG FSNIESFGEF YIDVQIKQDR DFYSDEKMVY SIFQNLIENA FTYRDIKKQK SSLYIRIEVD KQKSVIEFTD NGIGINKDLK DKVFDMFFRA SEISGGTGLG LYLVKMAVNK IGGRIQVNTE VSKGTTFTVV I
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