Gene CHU_3468 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3468 
SymbolarcB 
ID4186046 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp4012351 
End bp4014306 
Gene Length1956 bp 
Protein Length651 aa 
Translation table11 
GC content35% 
IMG OID638073456 
Productsensor histidine kinase 
Protein accessionYP_680045 
Protein GI110639835 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.355091 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAGG GGGTAATTTT TATATTACTT GGGCTTTATT GCGCGATTGT TCATGCTCAG 
ACCAGACCAT TGATCTTAAA CGATACAGCG GAAAAGTTTG AATGGCGCAA AGGAAATTAT
GCCATCTATC GGGATACTGT ACGGAACCTT CCGCTAAGCC GTATTTTAGA ACTTCAACGG
GAAGGTATAT TTAAAAAAAC AACATCAGAC GCACCACGCC TGCAATCTTC CAGACAGGAC
ATGTGGGCAA AGGTTATTGT TTACAACGGC AGCCTGAATC AAACAGAATG GCTGATTGAG
TTATATGATT TTCATATTGA TGAATACGAT ATCTACATAC TTCAAAAAGA TTCACTTTAT
GCGCATTTTA CAGGCGGTGA TTTACAACCT TTTCACAAGC GGAAAATAGA ACATAAAAAT
TTTATTCATG AGATCGTATT TGAACCCCAT CAGTTATATA CGTTATTTAT ACGCATTCAT
AGCAGACAAT CTGTTGCCGT TAATGGTGTA GTACGTACAT TTCCAAGTTT TTTAGAATAT
TCTAATAGAG AATATCTATT TCTGGCCATT TTTTACGGCG TTATTTTATT GATGGCGGTA
TATTGTGTTT GTATCTATGT ATTTACAAAA GAGAAAACGT ATATATATTT TGCTGCAAAT
GTTTTGTCTG TTGCTCTTTA CAGCTTAACA AATGATGGCC TGGGTTTTCA ATACATTTGG
CCCAATCATA TAAATTTTAA TGCAGAAGCG CAAAGCTTAG CGATTGCGCT GTTTTCAACA
ACAGCGCTCA TGTACACAAC AGCCTTTCTG AATGTTAAAA TAGAATCAAC AAAATATTGC
CTCGTGATCC GGGTAACAGC CGCTGTAAGG TTCCTGTTAT TTCTAATTGG CTTGTTATTT
TACAGGCCAC TGCTTTACTT TTATCAGCTC GATCTGTTAA TCCTGATTTT TATATTTTAT
ACGTCTATAG TATTTTATAA GAAAGATTTT AAAGCAGCGC GGTTTTTTAT ACTTGCTTAC
ACAGCACTAT TTATAGGCTT TTCGCTGAAT TTGTCTATTG TCTTAGGTGT TGGCTTTATA
CATCCGGTTA CGGTATACGG TTTGAATATT GGTATTGTCA TACAGCTGTT TCTGTTTTCA
TTTGCACTTG CAGATAGGAT AAGGCTTGCC AATAAAGATA ACCGGAACAC ACAATTACAG
ATCATTCATC AGCTGAAAGA AAATGAAATA CTGAAAGATA AACTCACAAA AGAGCTTGAA
GATAAGGTTA AAGAACGAAC GCAGGAACTG GAGTTTAAGA ATCAACAGCT GGACGCCTTC
GTTTACAAGG CTTCACACGA TATTAAAGGA CCTTTAAAAT CCATTATCGG TTTGGCCAAA
TTGGGTTTGC TGGATGTACA GGATCCCAAT GCCCGGGAAT ATTTTAAGCA TATTGAAACA
AGCTCTACAC GTTTGGATAA TCTGCTTCAG GATTTATTGC AGGTAGCAAA AATAAAAAAC
ACCGTTATTG AATCTACCGT TATTGATTTC AAAAAAATCA TTGATACAAT AAAAGATGGG
TTCAGTAATA TTGAATCGTT TGGTGAGTTT TATATTGATG TACAAATCAA ACAGGACCGC
GATTTTTATT CGGATGAAAA AATGGTCTAT TCCATTTTTC AGAATTTAAT TGAAAATGCG
TTTACCTACC GGGATATTAA AAAACAAAAA TCAAGTTTAT ATATCCGCAT TGAAGTTGAT
AAACAAAAAT CCGTTATAGA GTTTACCGAC AATGGAATCG GGATCAATAA AGACTTAAAA
GATAAAGTGT TCGATATGTT TTTCAGGGCC AGTGAAATTT CAGGCGGAAC AGGTCTGGGT
CTCTATTTAG TAAAAATGGC TGTAAATAAA ATAGGTGGAA GAATACAGGT AAACACAGAA
GTAAGCAAAG GCACAACTTT TACAGTAGTA ATCTGA
 
Protein sequence
MKKGVIFILL GLYCAIVHAQ TRPLILNDTA EKFEWRKGNY AIYRDTVRNL PLSRILELQR 
EGIFKKTTSD APRLQSSRQD MWAKVIVYNG SLNQTEWLIE LYDFHIDEYD IYILQKDSLY
AHFTGGDLQP FHKRKIEHKN FIHEIVFEPH QLYTLFIRIH SRQSVAVNGV VRTFPSFLEY
SNREYLFLAI FYGVILLMAV YCVCIYVFTK EKTYIYFAAN VLSVALYSLT NDGLGFQYIW
PNHINFNAEA QSLAIALFST TALMYTTAFL NVKIESTKYC LVIRVTAAVR FLLFLIGLLF
YRPLLYFYQL DLLILIFIFY TSIVFYKKDF KAARFFILAY TALFIGFSLN LSIVLGVGFI
HPVTVYGLNI GIVIQLFLFS FALADRIRLA NKDNRNTQLQ IIHQLKENEI LKDKLTKELE
DKVKERTQEL EFKNQQLDAF VYKASHDIKG PLKSIIGLAK LGLLDVQDPN AREYFKHIET
SSTRLDNLLQ DLLQVAKIKN TVIESTVIDF KKIIDTIKDG FSNIESFGEF YIDVQIKQDR
DFYSDEKMVY SIFQNLIENA FTYRDIKKQK SSLYIRIEVD KQKSVIEFTD NGIGINKDLK
DKVFDMFFRA SEISGGTGLG LYLVKMAVNK IGGRIQVNTE VSKGTTFTVV I