| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_3421 |
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| Symbol | nusA |
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| ID | 4186294 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 3899300 |
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| End bp | 3900556 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 638073411 |
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| Product | transcription elongation factor NusA |
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| Protein accession | YP_680000 |
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| Protein GI | 110639790 |
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| COG category | [K] Transcription |
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| COG ID | [COG0195] Transcription elongation factor |
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| TIGRFAM ID | [TIGR01953] transcription termination factor NusA |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGATACTT CAACTTTAAT AGAATCGTTT GCAGAGTTTG CAAAATTCAA GAGTATAGAC
CGCCCTACCA TGATGAAAAT CGTGGAAGAT GTGTTCCGCA CTATGATCCG TAAAAAATAC
GGAACAGATG ACAATTTCAA CGTTATCATT AACGTAGACA AAGGTGATCT TGAGATTTGG
TGGATGAGAG AAATTGTTTC AGATGATTTT GCTGAAGATA GTTTTGATTA TGATCCGAAC
AAACACATTT CGTTGACTGA TGCCCACTTA ATTGAAAAAG ATTTCGAAGA AGGTGAAGAA
GTGGCAACTG AAGTAAAATT AGAGGATTTT GGAAGAAGAA TGGTTCAGAC GGCACGTCAG
ACACTGATTC AAAAAGTAAA AGACCTTGAA AAAGATAATC TTTTCCAGAA ATATAAAGAC
CTGGTAGGTG AAATTATCAA CGGGGAAATT TATCAGGTAT TAAGCAAAGA GATTTTATTG
ATCGATGCAG ATGGTAATGA ATTAGCATTG CCTAAATACG AGCAGATCCC GAAAGACCGT
TTCCGTAAAG GCGATAATGT ACGCGCTATT GTACACCGCG TTGAAATGCA TAATGGAAAT
CCAAAAATTA TTTTATCCAG AACGTCACCT AAATTTTTAG AACGTTTGTT TGAACTTGAA
GTGCCGGAAG TATATGATGG ATTGATTTCA ATCCGTAATA TCGTTCGTGA ACCGGGTGAG
CGTGCTAAAG TTGCTGTTGA ATCGTACGAT GACCGTATTG ATCCGGTAGG CGCATGTGTT
GGTATGAAAG GTTCCCGTAT TCACAGCATT GTACGTGAGT TAGAGAATGA AAATATAGAT
GTAATCAATT TTACGGATAA CATTGACTTG TTTATTGCGC GTGCATTAAG CCCTGCTAAA
ATAAGCAGCC TTAAAGTGGA AGCGGATAAA GGAAGAGCTT CTGTTTACTT AAAGCCGGAT
CAGGTTTCTC TTGCAATCGG TAAAGGTGGC CAGAACATTA AACTTGCCAG CAAATTAGTA
GGCCTGGAAA TTGACGTATT CAGAGAATTA ACAGGTAATG AAGACAACGA AGATGTTGAC
TTAACAGAAT TTGTTGATGA AATTGAAGAT TGGATATTAG AAGAATTAAA ACGTATCGGT
CTGGATACAG CGAAGAGTGT ATTAGCTCTA AGTAAAGATG ACTTAGTACG TCGTACTGAA
TTGGAAGAAG AAACGGTTGA AGACGTACTT CAAATTCTAA GACAGGAATT TGAATAA
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| Protein sequence | MDTSTLIESF AEFAKFKSID RPTMMKIVED VFRTMIRKKY GTDDNFNVII NVDKGDLEIW
WMREIVSDDF AEDSFDYDPN KHISLTDAHL IEKDFEEGEE VATEVKLEDF GRRMVQTARQ
TLIQKVKDLE KDNLFQKYKD LVGEIINGEI YQVLSKEILL IDADGNELAL PKYEQIPKDR
FRKGDNVRAI VHRVEMHNGN PKIILSRTSP KFLERLFELE VPEVYDGLIS IRNIVREPGE
RAKVAVESYD DRIDPVGACV GMKGSRIHSI VRELENENID VINFTDNIDL FIARALSPAK
ISSLKVEADK GRASVYLKPD QVSLAIGKGG QNIKLASKLV GLEIDVFREL TGNEDNEDVD
LTEFVDEIED WILEELKRIG LDTAKSVLAL SKDDLVRRTE LEEETVEDVL QILRQEFE
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