Gene CHU_3373 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3373 
SymbolgltX 
ID4187162 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp3854762 
End bp3856315 
Gene Length1554 bp 
Protein Length517 aa 
Translation table11 
GC content42% 
IMG OID638073363 
Productglutamyl-tRNA synthetase 
Protein accessionYP_679952 
Protein GI110639742 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0008] Glutamyl- and glutaminyl-tRNA synthetases 
TIGRFAM ID[TIGR00464] glutamyl-tRNA synthetase, bacterial family 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0803791 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGATA CTAATAAACA AGTTCGAGTT CGATTTGCTC CATCCCCTAC GGGGCCTTTA 
CATATTGGCG GTGTGCGCAC GGCTTTATAC AATTATTTAT TTGCCCGTAA AATGGGCGGT
AAAATGTTGT TGCGTATAGA AGATACCGAT CAGAACCGTT TTGTACCAGG TGCGGAAGCA
TACATTCAGG AAGCACTTGC ATGGGTTGGT ATTGTAATAG ATGAAGGAGC CGGCGTTGGT
GGGCCGCATG CACCGTATAA GCAGTCTGAG CGTAAGCCGA TGTATCGGGA GTATGCAGAA
AAATTAATTG CTGAAGGAAA CGCTTATTAT GCGTTTGATA CATCCGAAGA ATTAGAAGCT
ATGAAAGAGC GGTTGAAAGC AGCAAAGGTT GCTTCACCTT CTTACAACAT GGTTACACGT
ATGCAAATGA ACAATTCATT AACCTTGCCT GAAGACGAAG TGAAAAGACG TCTGGATGCA
GGAGATGAAT ATGTAATCCG TTTGAAAGTT CCGCGTAAAG AAGAAATACG CCTGAATGAT
ATGATCCGTG GCTGGGTAGT AGTACACTCT TCAACCATTG ATGATAAAGT ATTGTTAAAA
TCGGATGGTA TGCCAACATA CCATTTAGCA AATATTGTTG ATGATCACTT AATGGAGATC
ACACACGTAA TACGTGGCGA AGAATGGCTG CCTTCTGCAC CCTTGCATGT ATTGCTTTAT
CGTTTCTTAG GCTGGGAAGA TACCATGCCG CAATTTGCGC ACTTACCGTT ATTGCTAAAG
CCGGATGGGA ATGGTAAATT AAGCAAACGT GATGCGGATG CGGGCGGTTT CCCGATATTC
CCGTTAGATT GGAAAGACCC GGCAAGCGGA GACACTTGGA TCGGCTTTAA ACAACAGGGA
TATTTACAGG AAGCAACGAC AAACTTCTTA GCCTTTTTAG GCTGGAACCC GGGTACACAA
CAAGAGTTGT TTACCATGGA TGAACTGATC GAAGCATTTA CAGTAGAGCG TATTGGTAAA
TCGGGAACGA AGTTCGATAT TAATAAAGCA AAGTGGTACA ACCAGCAATA CATGCGGCAG
TTGCCCGATG AAACTTTAAC ACGTTTATTA AAAGAAGAAG CAGATAAACA TCAGGCAAAA
TATGATGCGG CTAAACTTCC ATTGATCGCG CAGATGTTAA AAGAACGTTT GACGTTTGCT
AAAGATTACT GGATCGAAGG ACAATTCTTT TTTGAAGCAC CTGAAACATT TGATGAGAAG
GTGGCAAGTA CAAAATGGAA TGCCGAAGCA GTAACTGTTA TCAGTGCGTA CAAAGAGGCA
TTAGCTGCTT ACACAGGCGA ATTCAATGCA GAAAACGTGA AACATGTATT GCACGAAGTA
CTGGAAAAAG CGGATGTCAA AATAGGCAAG ATCATGCAGG CACTTCGCCT GGCTTTAACC
GGCGCAGGTG CAGGACCTGA TCTGATGCAA TTCATAGAAA TTGTTGGAAA AGAAGAGGCG
ATAAAAAGAA TGCAGTTTGC CCTTATAACA TTAAGTGAAA AAGTAAATTC ATAA
 
Protein sequence
MSDTNKQVRV RFAPSPTGPL HIGGVRTALY NYLFARKMGG KMLLRIEDTD QNRFVPGAEA 
YIQEALAWVG IVIDEGAGVG GPHAPYKQSE RKPMYREYAE KLIAEGNAYY AFDTSEELEA
MKERLKAAKV ASPSYNMVTR MQMNNSLTLP EDEVKRRLDA GDEYVIRLKV PRKEEIRLND
MIRGWVVVHS STIDDKVLLK SDGMPTYHLA NIVDDHLMEI THVIRGEEWL PSAPLHVLLY
RFLGWEDTMP QFAHLPLLLK PDGNGKLSKR DADAGGFPIF PLDWKDPASG DTWIGFKQQG
YLQEATTNFL AFLGWNPGTQ QELFTMDELI EAFTVERIGK SGTKFDINKA KWYNQQYMRQ
LPDETLTRLL KEEADKHQAK YDAAKLPLIA QMLKERLTFA KDYWIEGQFF FEAPETFDEK
VASTKWNAEA VTVISAYKEA LAAYTGEFNA ENVKHVLHEV LEKADVKIGK IMQALRLALT
GAGAGPDLMQ FIEIVGKEEA IKRMQFALIT LSEKVNS