Gene CHU_3307 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3307 
SymbolmreC 
ID4186939 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp3780037 
End bp3780876 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content39% 
IMG OID638073299 
Productrod shape-determining protein MreC 
Protein accessionYP_679889 
Protein GI110639679 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1792] Cell shape-determining protein 
TIGRFAM ID[TIGR00219] rod shape-determining protein MreC 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.198941 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATCGCT TACTCCAATT TATTATTAAC TTAAGAGTGT TCCTGGTATT TGTATGCCTG 
GAACTCTTTT GTTTAGGATG TATTGTACGT TATAATCCAT ATCAGGGCGC CGCTTATTTC
AGCACATCTA AAAATGTAGT TGGTAAAACA CTTGAAATGG ATAAAGCGGT TACAGGATAT
TTTAATCTGA CGCAGATCAA TGAAGATTTA GCAAAGCAGA ATGCCGAGCT GAAAAACCAA
TTATTTATTG AACTGCAGAA AAATAAAATA AACGCTGACA CATCCGTTCC GATCTTAAAA
GTGAAACAGT TTAACGTATC TGTAGCACGC GTTATTAATA ATAATACCAT CTACGCAAAT
AATTTCTTCA CACTGGATAA AGGTACACAC GATGGAGTCG CTATCGGTAT GGGTGTCATC
TCGCCAAATG GCATAGCGGG ACAAATAAAA GCCTGTTCAG AAAATTTCTC TACAGCAATT
TCTATCCTCA ATACCAAGTG GTCTGTTTCT GCCCGGATTA AAAATACAAA GGCTGACGGG
ATCATTGAAT GGGGCGGTAA AAATCCCAAC AATGTACGCT TCACCAATGT TGGCCGCCAC
CATAAAATTA AAATAGGAGA CACCGTAGTG ACCTCCGGAT ATAAAGAAAG CTTGTTCCCG
GAAGGTTTGT TGGTAGGTGT TATACAAAAT GTTGTTGAAG AAGGCGGGGC TTACTGGACA
ATCGATGTGA AGCTCGCAAC AGATTTCACC GCAATGGATT ATGTTTTCAT TATAAACAAT
TCATTGAAAC AGGAAAAGGA TAGCCTGGAA GCTCCATTCG TAAAAGATAT GAAACAATGA
 
Protein sequence
MYRLLQFIIN LRVFLVFVCL ELFCLGCIVR YNPYQGAAYF STSKNVVGKT LEMDKAVTGY 
FNLTQINEDL AKQNAELKNQ LFIELQKNKI NADTSVPILK VKQFNVSVAR VINNNTIYAN
NFFTLDKGTH DGVAIGMGVI SPNGIAGQIK ACSENFSTAI SILNTKWSVS ARIKNTKADG
IIEWGGKNPN NVRFTNVGRH HKIKIGDTVV TSGYKESLFP EGLLVGVIQN VVEEGGAYWT
IDVKLATDFT AMDYVFIINN SLKQEKDSLE APFVKDMKQ