Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_3281 |
Symbol | accD |
ID | 4184785 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 3753091 |
End bp | 3753939 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 638073273 |
Product | acetyl-CoA carboxylase, beta subunit |
Protein accession | YP_679863 |
Protein GI | 110639653 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0777] Acetyl-CoA carboxylase beta subunit |
TIGRFAM ID | [TIGR00515] acetyl-CoA carboxylase, carboxyl transferase, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.581034 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTTGGT TTAAAAGAAC TGAAAAAGGT ATCACTACCC CTACTGAAGA GAAAAGAGAA GTACCGGATG GTTTATGGTA TCAGTGTCCT GAATGTAAAA AAGTAGTACA TACAAGAGAG CACGAAGAAC ATGCCTGGAC ATGTATTGAG TGTAATTACC ACGCAAGAGT AGGCTCAAAA GAATATTTCG AATTGTTTTT TGATAACAAT GAATTTACAG AATTAGATGC TGGTTTGAGT TCTTCTGATC CGTTAAAATT CATCGATAGT CAACCGTACC CAAAACGTAT CAAAGCTGCT CAGGCTAAAA CCGGCTTAAC AGATGCAGTG CGTACAGCGC ACGGTAAAGT AAGCGGTAAA GAAGTTGTAA TCAGCTGTAT GGACTTTACC TTCATTGGCG GTTCTATGGG TTCTGTAGTG GGTGAAAAAA TCTCCAGAGG TATTGATGCA GCCCGGGCTA AAAAAGTGCC CTTTATCATG ATCTGTAAAT CAGGTGGCGC ACGTATGATG GAAGCTGGTT TCTCCTTGAT GCAAATGGCT AAAACATCTG CCAAACTTGC ATTACTTGCC GAAGAAGGTC TTCCGTACAT TTCTATTTTA ACAGATCCAA CAACAGGCGG TGTTACTGCA TCGTATGCAA TGTTAGGGGA CATCAATATT GCTGAGCCGG GAGCCTTGAT TGGTTTTGCC GGACCAAGGG TTGTTAGGGA AACGATCGGT AAAGATTTGC CGGCAGGTTT CCAGACATCT GAATTTTTAC TGGAACATGG TTTCCTTGAT TTCATCGTTG ACAGAAAAGA AATGAAGAAA CAGGTTTCTG ATTTCTTACG AATGGTTGAG AAAAAGTAA
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Protein sequence | MSWFKRTEKG ITTPTEEKRE VPDGLWYQCP ECKKVVHTRE HEEHAWTCIE CNYHARVGSK EYFELFFDNN EFTELDAGLS SSDPLKFIDS QPYPKRIKAA QAKTGLTDAV RTAHGKVSGK EVVISCMDFT FIGGSMGSVV GEKISRGIDA ARAKKVPFIM ICKSGGARMM EAGFSLMQMA KTSAKLALLA EEGLPYISIL TDPTTGGVTA SYAMLGDINI AEPGALIGFA GPRVVRETIG KDLPAGFQTS EFLLEHGFLD FIVDRKEMKK QVSDFLRMVE KK
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