Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_3238 |
Symbol | |
ID | 4184334 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 3696300 |
End bp | 3697460 |
Gene Length | 1161 bp |
Protein Length | 386 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 638073231 |
Product | hypothetical protein |
Protein accession | YP_679821 |
Protein GI | 110639611 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.124507 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAAAAT TACTCGTTTC AGTATTGTTT TTAACAACGG TTGGTATTTT CCACACGTTT GGTCAATCTG CACAAAACCA ATATTCACAA ACCATTACCA CTGCGGTTCC ATTTTTAAGT ATCACTCCGG ATGCACGTGC CGGGGGGATG GGCGATGCAG GTGCTGCCAC TTCACCGGAT GCAAATGCAA CATACTGGAA TCCCGGAAAA CTGGCCTTTG CCAAATATGA CATGAGTGCC GCAATTTCGT ACAACCCCTG GTTGCGCAAA TTGGTAAACG ATATGTCTCT GTCTTATTTA TCCGCTTATA AAAAATTACG TAAAGAAGAT GCCGTTGGCG TAAGTTTTAA ATACTTCAAC TTAGGTCAGG TAACATTTAC AGATAACAGC GGTAACATTA TCCGCGATTT TCAACCGAAT GAATTGTCGT TTGGGTTAAC CTATTCAAGA ATGTTATCTA AAAACTTTTC GCTTGGATTA GGTGTTAAAT ATTTCCGTTC AGATTTAGTG GGCAGTTACA CGTCAGGTAC AGGAACGGTT GCTAAAGCAA TCAATAGTGT ATCTGCAGAT ATTGGCGCGT ATTACACAAA AGATCTGCTG GTAGGCGGAA AAAATTCAAA CATTGCTTTC GGTGCGGTTA TTAATGACAT CGGACCAAAG GTTACTTATA CGGATATTGA CAACAAAAAC TTTATTCCTA CAAACTTCCG TCTTGGCGGT ACATACACCA TTGAGGCTGA TGCCTACAAT AAATTTTCAT TCTCTCTTGA TGCCAATAAA TTGATGGTAC CAAGCAAGTG GGATAGTGTA GGTACAAATC CAAAAGATAT GGGCATGCTT CAAGGTATGT TCAGTTCATT CACAGATTCT CAATATGGCT TTAAAGGAGA AATGAGAGAA ATCATCTTAT GTATGGGTGC TGAATATTGG TATGATAACC TGTTTGCTAT CCGAGGAGGT TATCACTATG AAAATCCGCA AAACGGAAAC CGTCGTTATG CAAACGTTGG TATCGGGATC CGTTACAAAG TATTTGGTTT GGATATGGCT TATCTGATAC CGATTCAACA ATCCAATCCA TTGGCTGAAA CACTTCGATT TACGTTACAT TTCAACTTTG AATCGAAAAA ACAAATTGAT GATTCTGTTA TAGATAATTA A
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Protein sequence | MQKLLVSVLF LTTVGIFHTF GQSAQNQYSQ TITTAVPFLS ITPDARAGGM GDAGAATSPD ANATYWNPGK LAFAKYDMSA AISYNPWLRK LVNDMSLSYL SAYKKLRKED AVGVSFKYFN LGQVTFTDNS GNIIRDFQPN ELSFGLTYSR MLSKNFSLGL GVKYFRSDLV GSYTSGTGTV AKAINSVSAD IGAYYTKDLL VGGKNSNIAF GAVINDIGPK VTYTDIDNKN FIPTNFRLGG TYTIEADAYN KFSFSLDANK LMVPSKWDSV GTNPKDMGML QGMFSSFTDS QYGFKGEMRE IILCMGAEYW YDNLFAIRGG YHYENPQNGN RRYANVGIGI RYKVFGLDMA YLIPIQQSNP LAETLRFTLH FNFESKKQID DSVIDN
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