Gene CHU_3238 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3238 
Symbol 
ID4184334 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp3696300 
End bp3697460 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content39% 
IMG OID638073231 
Producthypothetical protein 
Protein accessionYP_679821 
Protein GI110639611 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.124507 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAAAT TACTCGTTTC AGTATTGTTT TTAACAACGG TTGGTATTTT CCACACGTTT 
GGTCAATCTG CACAAAACCA ATATTCACAA ACCATTACCA CTGCGGTTCC ATTTTTAAGT
ATCACTCCGG ATGCACGTGC CGGGGGGATG GGCGATGCAG GTGCTGCCAC TTCACCGGAT
GCAAATGCAA CATACTGGAA TCCCGGAAAA CTGGCCTTTG CCAAATATGA CATGAGTGCC
GCAATTTCGT ACAACCCCTG GTTGCGCAAA TTGGTAAACG ATATGTCTCT GTCTTATTTA
TCCGCTTATA AAAAATTACG TAAAGAAGAT GCCGTTGGCG TAAGTTTTAA ATACTTCAAC
TTAGGTCAGG TAACATTTAC AGATAACAGC GGTAACATTA TCCGCGATTT TCAACCGAAT
GAATTGTCGT TTGGGTTAAC CTATTCAAGA ATGTTATCTA AAAACTTTTC GCTTGGATTA
GGTGTTAAAT ATTTCCGTTC AGATTTAGTG GGCAGTTACA CGTCAGGTAC AGGAACGGTT
GCTAAAGCAA TCAATAGTGT ATCTGCAGAT ATTGGCGCGT ATTACACAAA AGATCTGCTG
GTAGGCGGAA AAAATTCAAA CATTGCTTTC GGTGCGGTTA TTAATGACAT CGGACCAAAG
GTTACTTATA CGGATATTGA CAACAAAAAC TTTATTCCTA CAAACTTCCG TCTTGGCGGT
ACATACACCA TTGAGGCTGA TGCCTACAAT AAATTTTCAT TCTCTCTTGA TGCCAATAAA
TTGATGGTAC CAAGCAAGTG GGATAGTGTA GGTACAAATC CAAAAGATAT GGGCATGCTT
CAAGGTATGT TCAGTTCATT CACAGATTCT CAATATGGCT TTAAAGGAGA AATGAGAGAA
ATCATCTTAT GTATGGGTGC TGAATATTGG TATGATAACC TGTTTGCTAT CCGAGGAGGT
TATCACTATG AAAATCCGCA AAACGGAAAC CGTCGTTATG CAAACGTTGG TATCGGGATC
CGTTACAAAG TATTTGGTTT GGATATGGCT TATCTGATAC CGATTCAACA ATCCAATCCA
TTGGCTGAAA CACTTCGATT TACGTTACAT TTCAACTTTG AATCGAAAAA ACAAATTGAT
GATTCTGTTA TAGATAATTA A
 
Protein sequence
MQKLLVSVLF LTTVGIFHTF GQSAQNQYSQ TITTAVPFLS ITPDARAGGM GDAGAATSPD 
ANATYWNPGK LAFAKYDMSA AISYNPWLRK LVNDMSLSYL SAYKKLRKED AVGVSFKYFN
LGQVTFTDNS GNIIRDFQPN ELSFGLTYSR MLSKNFSLGL GVKYFRSDLV GSYTSGTGTV
AKAINSVSAD IGAYYTKDLL VGGKNSNIAF GAVINDIGPK VTYTDIDNKN FIPTNFRLGG
TYTIEADAYN KFSFSLDANK LMVPSKWDSV GTNPKDMGML QGMFSSFTDS QYGFKGEMRE
IILCMGAEYW YDNLFAIRGG YHYENPQNGN RRYANVGIGI RYKVFGLDMA YLIPIQQSNP
LAETLRFTLH FNFESKKQID DSVIDN