Gene CHU_3226 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3226 
SymbolaroK 
ID4184751 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp3679515 
End bp3680033 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content37% 
IMG OID638073219 
Productshikimate kinase 
Protein accessionYP_679809 
Protein GI110639599 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0703] Shikimate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTATTT ATCTTATTGG CCTTCCTGGT TCAGGTAAGT CAACCATCGG AAAAACATTG 
GCGCAAAAGC TCAAGTATAC ATTCTTTGAT ATGGATGATG CTATCTGCGC GCAGGAGAAA
AAAACCATAG AAGAAATTTT TGCAGATAAA GGAGAAAATT ATTTCAGAGA GTTAGAACAT
AGTATCCTGC ACGATACGTT TGAATTAAAG AATGCAATTA TTTCAACAGG AGGTGGTGTG
CCGTGTTACT TTGACAATAT CACAGAAATG AAAAAGCATG GGTTAACTAT TTTTATTAAT
CCTTCTGCGG ATGAATTAGC CAATAGACTT GTGGGCCAGG GTGGACAGAA CCGCCCCATG
TTGAAAGGTA AAACACACAA ACAGGTATTG GATTTTATTG AAACGAAATA CAGGGAACGT
GCACCTTATT ACGAACAGGC AAAACTGATT TTCAGTACAA ATAAATTGAA TGCAGAAGAA
CTGCTGAAAC ACTTAAAAAA GGAAAAACTT ATTTCTTGA
 
Protein sequence
MLIYLIGLPG SGKSTIGKTL AQKLKYTFFD MDDAICAQEK KTIEEIFADK GENYFRELEH 
SILHDTFELK NAIISTGGGV PCYFDNITEM KKHGLTIFIN PSADELANRL VGQGGQNRPM
LKGKTHKQVL DFIETKYRER APYYEQAKLI FSTNKLNAEE LLKHLKKEKL IS