| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_3161 |
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| Symbol | rplD |
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| ID | 4186650 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 3597438 |
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| End bp | 3598064 |
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| Gene Length | 627 bp |
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| Protein Length | 208 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 638073149 |
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| Product | 50S ribosomal protein L4 |
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| Protein accession | YP_679743 |
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| Protein GI | 110639534 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0088] Ribosomal protein L4 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.614669 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAACTTT CCTTATTAAA TATAAAAGGT AAAGATACTG GAAAGAAAGT AGTTCTTTCT
GACGATATCT TCGCGGTAGA GCCTAACAAC CACGCGATCT ATTTAGATGT GAAACAATAT
CTTGCTCACC AGAGACAAGG TACTCATAAA GCTAAAGAAC GTGCTGAAGT TTCTTTCTCA
ACAAAGAAAC TTAAAAAGCA AAAAGGTACA GGCGGTGCGA GAGCAGGTAG CCGTAAATCA
CCAATATTTG TTGGTGGTGG TACTATCTTC GGTCCAAGAC CAAGAACATA CGGTTTCAAA
GTAAATAAAA AAGTTAAAGA CCTTGCACGT AAGTCTGCAT TCAGCCACAA ACTGAAAGAA
AGCAACGTGA CAGTCCTTGA GAACTTCACT TTGAATGCCC CAAAAACTAA AGATTATTTA
GCAATACTTA AAGATCTTTC TTTGGATACA AAAAAGACTT TATTCGTAAT CGCTGATATC
GATAAGAATA TAATCCTTTC AAGCAGAAAC TTGAAAAAAG CTAAAGTTGT TAGCGTAGAC
CAAATCAATA CATATGATTT AGTGAATGCA GACAAAGTAG TTATTTCTGA AGGATCTGTT
TCGAAAATTG AAGCATTACT CAACTAA
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| Protein sequence | MELSLLNIKG KDTGKKVVLS DDIFAVEPNN HAIYLDVKQY LAHQRQGTHK AKERAEVSFS
TKKLKKQKGT GGARAGSRKS PIFVGGGTIF GPRPRTYGFK VNKKVKDLAR KSAFSHKLKE
SNVTVLENFT LNAPKTKDYL AILKDLSLDT KKTLFVIADI DKNIILSSRN LKKAKVVSVD
QINTYDLVNA DKVVISEGSV SKIEALLN
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