Gene CHU_3158 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3158 
SymbolrpsS 
ID4186647 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp3596017 
End bp3596286 
Gene Length270 bp 
Protein Length89 aa 
Translation table11 
GC content37% 
IMG OID638073146 
Product30S ribosomal protein S19 
Protein accessionYP_679740 
Protein GI110639531 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0185] Ribosomal protein S19 
TIGRFAM ID[TIGR01050] ribosomal protein S19, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.558725 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACGTT CGCTCAAAAA AGGCCCATAC ATAGATTTCC GTCTTGACAA TAAGGTTCAG 
GCGTTGAATG ATTCAGCTAA GAAGACTGTG ATCAAAACTT GGTCAAGAAG ATCAATGATA
TCTCCTGAAT TCGTTGGACA TACTTTCGCA GTACACAACG GAAATAAATT TATCCCTGTT
TATGTTACAG AAAACATGGT AGGACATAAA TTTGGTGAAT TTTCACCAAC AAGGACTTTC
AAAGGTCACG CTGCAAAAGG TAAGAAATAA
 
Protein sequence
MSRSLKKGPY IDFRLDNKVQ ALNDSAKKTV IKTWSRRSMI SPEFVGHTFA VHNGNKFIPV 
YVTENMVGHK FGEFSPTRTF KGHAAKGKK