| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_3146 |
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| Symbol | rplR |
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| ID | 4183624 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 3590750 |
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| End bp | 3591100 |
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| Gene Length | 351 bp |
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| Protein Length | 116 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 638073134 |
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| Product | 50S ribosomal protein L18P |
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| Protein accession | YP_679728 |
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| Protein GI | 110639519 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0256] Ribosomal protein L18 |
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| TIGRFAM ID | [TIGR00060] ribosomal protein L18, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.00662623 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.561423 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCAACTA AGAAAGATCT TAGAAGGCTC AGAATAAAAA GAGGTATCAG AAATAAAATT
TCTGGTACTG CTGAGAAACC GAGATTATCT GTATTCAGAA GCAATACAGG TATATCAGCT
CAATTAATTG ATGATATCAG TGGCTTAACT CTTGCAAGCT GTTCTTCTGT TGAATTCAAG
TCTAGTAAAG GTACTAAATG CGAAATTTCA ACATTAGTAG GAAAAAAAAT TGCAGAAAAA
GCAGCTACTA AAGGCATCAA AAACATTGTT TTTGATAGAG GTGGCTTTTT GTATCACGGT
CGTGTGAAAG CATTGGCTGA AGGTGCAAGA GAAGGTGGTT TAGCATTCTA A
|
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| Protein sequence | MATKKDLRRL RIKRGIRNKI SGTAEKPRLS VFRSNTGISA QLIDDISGLT LASCSSVEFK
SSKGTKCEIS TLVGKKIAEK AATKGIKNIV FDRGGFLYHG RVKALAEGAR EGGLAF
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