Gene CHU_3131 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3131 
SymbolponA 
ID4186812 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp3578883 
End bp3581162 
Gene Length2280 bp 
Protein Length759 aa 
Translation table11 
GC content40% 
IMG OID638073119 
Productglycosyltransferase 
Protein accessionYP_679713 
Protein GI110639504 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG5009] Membrane carboxypeptidase/penicillin-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.47312 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.698693 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATACAT ATACACGGTA CGTTACCATA ATCTGGACAC TATTTATAGG CGGTTTATAC 
ACCATATTTT TATGGTCTGT TTTAATACGC TTTAATTATT TAGGTGCGTT TGGCGAAATG
CCGGATCTTG TAAAATTAGA AAATCCTAAA AATGAACTGG CATCAGAAGT ATACTCTTCC
GATGGTGTAT TGCTTGGTAA GTATTTCAGA GAAAACAGAA GCCCGGTTAC GTACGCAGAA
ATTTCTCCGA ATGTAATCAA TGCATTAATT ACTACGGAGG ATATTCGTTT CAGAGAGCAC
GCAGGCATTG ACTTAAAAGG TGTGTTCGCA ATTTTTTACT ATATGGTAAA AGGTGATCAG
CGCGGGTCCA GTACAATTAC GCAGCAACTT GCCAAGAATT TATTTAAGAC TCGAGGCATA
AAGGACAAAG GGTTACTGGG ATACATTCCT GGTTTTAATA TTTTAATTGC TAAAGTAAAA
GAATGGGAAC TTGCTATTAC ATTAGAGAAG ATGTATACCA AAAATGAAAT TCTTGCGCTT
TACTTAAACA CGGTTGATTT CGGGAGTAAT TCATTTGGAA TAAAAGTAGC AGCTAAAACG
TTTTTTCAAA CAAGACAGGA TAGCTTAACC ATTCCGCAAG CCGCGATGCT TATTGGATTG
CTGAAGGCCC CAACATCATA TAGCCCGATT TTAAATCCTG AAAATTCATT TAAAAGAAGA
AACACGGTAT TGCAATTGAT GTATGAAAAT GGAATCATTG ATCAAACGCA ATTCAATTCG
TATAAAAAGC AGCCGATCAA ATTGAATTAC GAAGTGGAAA ATCACACCGA TGGTCTTGCA
CCTTATTTCA GAACAATGGT TAGTAAATAC CTGCAGGAGT GGTGTAAGAA AAACGATAAA
GATTTATATG GCGGCGGTTT AAAAATATAT ACAACGATTG ATTCACGTAT GCAGGTGCAT
GCGGAAGCAG CCGTTGCAGA GCATATGAAA GTACTGCAAC GAAGGTTCAA CAAGCATTGG
GAAGGTGAAA AACCATGGCG TTATCAGAAC AAAACGGAGA TCCCGAATTT TATTGAAAAC
ATCGCAAAGA AAACAGAACG TTATAAAGCG CTTGAAGATA AATATGGAAA AGATCATGAT
TCTGTCATGA TTGCCTATAA GACACCAATC CCGATGACTG TGTTTAGCTG GAGCGGAGAT
ATTGACACGT TAATGAGCCC ATATGATTCG ATTGTATATT ACAAACATTT TTTACATACG
GGTTTTATGA CGATGGATCC ATATTCCGGT TTTATTAAAA CCTGGGTCGG AGGCATTAAC
TACAAGCATT TCCAATATGA CCATGTGCAG CAAAGTCAGC GCCAGCCCGG GTCTTCGTTC
AAACCATTTG TATATGCAAC GGCTATAGCA AAGGGGGTTT CACCTTGTAC ACTGGTGCCG
GATTTACCTA TTACATTTAA ATATAAAGAA GACGGAAAAG AAATTGTGTG GACACCACGC
AATGCTGACT GGGTGTACTC GGGAGATTCT TTAAACTTAC GTCAGGGGAT GGCGCGGTCT
ATCAATACGA TTGCAGCGCG TGTAACAAAG ATGGTTGGTG TACAGCCAGT TATTGATATG
GCGCACAACC TCGGCATTGA AAGTGAATTG CGTCCGGTTC CTTCGGTATG TTTAGGATCA
AGTGATGTAA ACGTTTTTGA AATGGTAGGT GCGTACAGTA CGTTTTTAAA TAAAGGTGTA
TGGACAGAGC CAACGTTTAT TGAACGTATT GAAGATAATA GCGGTAATGT TATTTATGAG
GCAATTCCTA AACGCAGAGA TGCATTAACA GAAGAGGTTG CGGCTGTCAT GGTGCATATG
CTTAAAGGTG GCACAGAAGA GGGCGGAGGT ACGTCTCAGG CATTGTTCCA ATATGATATA
TTCAAAGGCA ATGAAATGGG CGGTAAGACT GGTACATCTT CCAATTATTC AGATGGATGG
TTCATGGGAA TATCTACGAA ACTTGTAGGC GGTGTATGGG TAGGGGGAGA AGACCGCAGC
ATACATTTCA GAACTTCTGC TACCGGAGAA GGGTCTAAGA CAGCCTTGCC CATCTTCGGC
TTATTTATGG AAAAAGTATA CGCAGATAAT TCGCTGGATA TTAAAATGGG CAGATTTAAA
ATGCCGGCGA AATTAAGTAT CAATATTAAT TGTCCGAGAA GAGCTTCACG TGTTGTTGTC
GATAGTCTTG CGATTTCTGA AGAAGAAGAT CAATTGCCGG AAGCAGAAAT CAAAGAGTAG
 
Protein sequence
MNTYTRYVTI IWTLFIGGLY TIFLWSVLIR FNYLGAFGEM PDLVKLENPK NELASEVYSS 
DGVLLGKYFR ENRSPVTYAE ISPNVINALI TTEDIRFREH AGIDLKGVFA IFYYMVKGDQ
RGSSTITQQL AKNLFKTRGI KDKGLLGYIP GFNILIAKVK EWELAITLEK MYTKNEILAL
YLNTVDFGSN SFGIKVAAKT FFQTRQDSLT IPQAAMLIGL LKAPTSYSPI LNPENSFKRR
NTVLQLMYEN GIIDQTQFNS YKKQPIKLNY EVENHTDGLA PYFRTMVSKY LQEWCKKNDK
DLYGGGLKIY TTIDSRMQVH AEAAVAEHMK VLQRRFNKHW EGEKPWRYQN KTEIPNFIEN
IAKKTERYKA LEDKYGKDHD SVMIAYKTPI PMTVFSWSGD IDTLMSPYDS IVYYKHFLHT
GFMTMDPYSG FIKTWVGGIN YKHFQYDHVQ QSQRQPGSSF KPFVYATAIA KGVSPCTLVP
DLPITFKYKE DGKEIVWTPR NADWVYSGDS LNLRQGMARS INTIAARVTK MVGVQPVIDM
AHNLGIESEL RPVPSVCLGS SDVNVFEMVG AYSTFLNKGV WTEPTFIERI EDNSGNVIYE
AIPKRRDALT EEVAAVMVHM LKGGTEEGGG TSQALFQYDI FKGNEMGGKT GTSSNYSDGW
FMGISTKLVG GVWVGGEDRS IHFRTSATGE GSKTALPIFG LFMEKVYADN SLDIKMGRFK
MPAKLSININ CPRRASRVVV DSLAISEEED QLPEAEIKE