Gene CHU_3075 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3075 
SymbolumuC 
ID4183943 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp3512504 
End bp3513763 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content44% 
IMG OID638073063 
ProductDNA repair nucleotidyltransferase/DNA polymerase 
Protein accessionYP_679657 
Protein GI110639448 
COG category[L] Replication, recombination and repair 
COG ID[COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACGCAT TAATCGACTG CAACTGTTTC TACGTTTCCT GTGAACGTGT CTTCCGTCCC 
GACCTGCGGC AGCAGCCGGT TGTTGTGCTT TCTAACAACG ACGGCTGTGT GATCTCGCGT
TCCGATGAAG CTAAAGCAAT CGGTGTTAAA ATGGGTGAAC CATTTTTTAA AATGAAAGAG
CTGGTGCGTA ATGGTAAGGT GACTGCTTTC TCTTCAAACT ATACGCTGTA TGGGGATCTG
TCTGATCGTG TAATGAAAAC GCTTGCTTCC ATTGTGCCGG ATATAGAAGT CTATTCCATT
GATGAAGCAT TTTTGCATCT GAATGAGAGC CATACGGATT TAGAAACACT TGGCCATACC
ATTCGCAATA CAGTTAAACA GCATACCGGA ATCCCGGTAG GCGTGGGCAT TGCGCCAACC
AAGACACTCG CCAAGCTGGC GAACCGTCTT TCAAAAAAAA CAGGCGGCGT ACATATTATT
TATCCGGATA ATATTCAGGA AAAGCTGAAT GCGTGCGCAC TGCAGGATGT ATGGGGCATC
GGCAGGCGGA ATGCGAAACG GCTGCAGGCA AATTATGTTG ATACCATTGA GCAGTTTGTG
AATCAGCGCG AAGAATGGGT ACGCCAGCAT TTTTCAGTGA TCGGGCTGCG TACATATAAG
GAATTAAAAG GAATTCCGTG CATTGATATG GAAGATGAAT TGACGGAAAA AAAATCCATC
TGTACTTCAC GTTCATTCGG TGAACTGCAG AATACATTTG CCTCTATCCA GGAAGCTATA
GCCACACACG CTGCCAGCTG TGCCGAGAAA TTACGCAAAC AAAAATGTGC CGCAGCCGGT
ATGTATGTGT CCTTATCAAA AAGCCGCTTT ACCGACCAGG AAGGCGATAA ATATTTTGGC
ACCTACATTA AATTACCACA GGCAACCAAC AATACAGCCA CGTTGATTCA ATATGCTTCA
AAAGGGTTAG AGCTCTTGTT TAAGAAAGAT GTCTATTATA AAAAATGTGG CGTAACCGTT
ATTGATATTG TTCCCGAAGA AAAGATCCAG TTAAATTTAT TCGAACCCCA AAAGAATGCG
CGGTTGCATG CATTGGAAGA CACGATTGAT AAACTGAATC AGAAACTGGG AAAGAATGTC
CTTCGGCAAG CCATACAAGG TAATGATAAC AATACCTGGA AGCTGCGCTG TGAAAACATG
TCGCCCAACT ATACGACCAG GATAGGGGAG ATACTGGTCG TGCATGTAGG TAATAAGTAA
 
Protein sequence
MYALIDCNCF YVSCERVFRP DLRQQPVVVL SNNDGCVISR SDEAKAIGVK MGEPFFKMKE 
LVRNGKVTAF SSNYTLYGDL SDRVMKTLAS IVPDIEVYSI DEAFLHLNES HTDLETLGHT
IRNTVKQHTG IPVGVGIAPT KTLAKLANRL SKKTGGVHII YPDNIQEKLN ACALQDVWGI
GRRNAKRLQA NYVDTIEQFV NQREEWVRQH FSVIGLRTYK ELKGIPCIDM EDELTEKKSI
CTSRSFGELQ NTFASIQEAI ATHAASCAEK LRKQKCAAAG MYVSLSKSRF TDQEGDKYFG
TYIKLPQATN NTATLIQYAS KGLELLFKKD VYYKKCGVTV IDIVPEEKIQ LNLFEPQKNA
RLHALEDTID KLNQKLGKNV LRQAIQGNDN NTWKLRCENM SPNYTTRIGE ILVVHVGNK