Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_3075 |
Symbol | umuC |
ID | 4183943 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 3512504 |
End bp | 3513763 |
Gene Length | 1260 bp |
Protein Length | 419 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 638073063 |
Product | DNA repair nucleotidyltransferase/DNA polymerase |
Protein accession | YP_679657 |
Protein GI | 110639448 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTACGCAT TAATCGACTG CAACTGTTTC TACGTTTCCT GTGAACGTGT CTTCCGTCCC GACCTGCGGC AGCAGCCGGT TGTTGTGCTT TCTAACAACG ACGGCTGTGT GATCTCGCGT TCCGATGAAG CTAAAGCAAT CGGTGTTAAA ATGGGTGAAC CATTTTTTAA AATGAAAGAG CTGGTGCGTA ATGGTAAGGT GACTGCTTTC TCTTCAAACT ATACGCTGTA TGGGGATCTG TCTGATCGTG TAATGAAAAC GCTTGCTTCC ATTGTGCCGG ATATAGAAGT CTATTCCATT GATGAAGCAT TTTTGCATCT GAATGAGAGC CATACGGATT TAGAAACACT TGGCCATACC ATTCGCAATA CAGTTAAACA GCATACCGGA ATCCCGGTAG GCGTGGGCAT TGCGCCAACC AAGACACTCG CCAAGCTGGC GAACCGTCTT TCAAAAAAAA CAGGCGGCGT ACATATTATT TATCCGGATA ATATTCAGGA AAAGCTGAAT GCGTGCGCAC TGCAGGATGT ATGGGGCATC GGCAGGCGGA ATGCGAAACG GCTGCAGGCA AATTATGTTG ATACCATTGA GCAGTTTGTG AATCAGCGCG AAGAATGGGT ACGCCAGCAT TTTTCAGTGA TCGGGCTGCG TACATATAAG GAATTAAAAG GAATTCCGTG CATTGATATG GAAGATGAAT TGACGGAAAA AAAATCCATC TGTACTTCAC GTTCATTCGG TGAACTGCAG AATACATTTG CCTCTATCCA GGAAGCTATA GCCACACACG CTGCCAGCTG TGCCGAGAAA TTACGCAAAC AAAAATGTGC CGCAGCCGGT ATGTATGTGT CCTTATCAAA AAGCCGCTTT ACCGACCAGG AAGGCGATAA ATATTTTGGC ACCTACATTA AATTACCACA GGCAACCAAC AATACAGCCA CGTTGATTCA ATATGCTTCA AAAGGGTTAG AGCTCTTGTT TAAGAAAGAT GTCTATTATA AAAAATGTGG CGTAACCGTT ATTGATATTG TTCCCGAAGA AAAGATCCAG TTAAATTTAT TCGAACCCCA AAAGAATGCG CGGTTGCATG CATTGGAAGA CACGATTGAT AAACTGAATC AGAAACTGGG AAAGAATGTC CTTCGGCAAG CCATACAAGG TAATGATAAC AATACCTGGA AGCTGCGCTG TGAAAACATG TCGCCCAACT ATACGACCAG GATAGGGGAG ATACTGGTCG TGCATGTAGG TAATAAGTAA
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Protein sequence | MYALIDCNCF YVSCERVFRP DLRQQPVVVL SNNDGCVISR SDEAKAIGVK MGEPFFKMKE LVRNGKVTAF SSNYTLYGDL SDRVMKTLAS IVPDIEVYSI DEAFLHLNES HTDLETLGHT IRNTVKQHTG IPVGVGIAPT KTLAKLANRL SKKTGGVHII YPDNIQEKLN ACALQDVWGI GRRNAKRLQA NYVDTIEQFV NQREEWVRQH FSVIGLRTYK ELKGIPCIDM EDELTEKKSI CTSRSFGELQ NTFASIQEAI ATHAASCAEK LRKQKCAAAG MYVSLSKSRF TDQEGDKYFG TYIKLPQATN NTATLIQYAS KGLELLFKKD VYYKKCGVTV IDIVPEEKIQ LNLFEPQKNA RLHALEDTID KLNQKLGKNV LRQAIQGNDN NTWKLRCENM SPNYTTRIGE ILVVHVGNK
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