| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_3049 |
|---|
| Symbol | dfr |
|---|
| ID | 4183432 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cytophaga hutchinsonii ATCC 33406 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008255 |
|---|
| Strand | - |
|---|
| Start bp | 3491460 |
|---|
| End bp | 3491993 |
|---|
| Gene Length | 534 bp |
|---|
| Protein Length | 177 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 638073038 |
|---|
| Product | dihydrofolate reductase |
|---|
| Protein accession | YP_679632 |
|---|
| Protein GI | 110639423 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0262] Dihydrofolate reductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 0.611041 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.73255 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCTGG ATGGATTCTG TGATCATACA GCAGTGATTG CCGATGAAGA AATGCACCAG
CATGTAAACG ATCTTTTTAA AACGGCAGAT ACAACTATTT TCGGACGTGT TACCTACCAG
CTTATGGAAA GCGGTTGGCC ACCAATTGTA AAAGAGCCTA CAGGTGTTAA GGCCATTGAT
GAATTTGCTA TATTGATTGA TACCATACAT AAAATTGTTT TCTCCCATAC ACTGAAAGGG
CTTACCTGGA AAAATAGCAC ACTTGCCAAA GGTGAATTAA AAGCAGAAAT TATCCGCTTA
AAGCAACAGC CAGGGAAAAA TATTCTTGTC GGAAGTCCCA GTCTTATTGT AGCGTTAACG
CAATTCGGTT TGATCGATGA ATACCAGTTA TGCATACAGC CAATTATTTT AGGTAAAGGG
CTAATCTTGT TTAAACACAT GCAGGATCGG ATAGATTTGA AATGCATACG AACAGAAACA
TATGCATCTG GCGCTATCCT TGCACGCTAT GAACCCGCAA CTAAAAATCA ATAA
|
|---|
| Protein sequence | MTLDGFCDHT AVIADEEMHQ HVNDLFKTAD TTIFGRVTYQ LMESGWPPIV KEPTGVKAID
EFAILIDTIH KIVFSHTLKG LTWKNSTLAK GELKAEIIRL KQQPGKNILV GSPSLIVALT
QFGLIDEYQL CIQPIILGKG LILFKHMQDR IDLKCIRTET YASGAILARY EPATKNQ
|
|---|
| |