Gene CHU_3043 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3043 
Symbol 
ID4183426 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp3485048 
End bp3486349 
Gene Length1302 bp 
Protein Length433 aa 
Translation table11 
GC content37% 
IMG OID638073032 
Productthioredoxin family protein 
Protein accessionYP_679626 
Protein GI110639417 
COG category[C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0526] Thiol-disulfide isomerase and thioredoxins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTTATCTG CTGTTACGGC AAAACCAATA AGTATTAAAG GGAAGTTCAC AAAGACGGAG 
ACTGGTTACT CTACCATTTA TTTGTATAAA TATTTAGGAA ATGCTGTATA TGTATTCGAT
TCAACGAAAT ATGTTAACGG TGCATTCGAA TTTAAATTCA ATGATGTAAT TCCAACAGGT
TTTTATAAAA TTGGTTTTGA TAAAGCGGAT GCAATAACGC TCGTTGCAGG GTATGAAAGC
ATTGTTATTA CAGGTAATCC CGATATTGAG CGCAGCATGA CTATTACAGG CTCAAAAGAA
AACGACCTGT TTCATGAATA TCAAAAAATA AATAAGACAC AGAATGCTCA AAATGCAATT
CTGAATCAAC AGGCACAACA ATTACAGCAA AGACCTGGCA TGACGGAAGA GTTATTTAAT
ATCGAAATTG CCGGATTAAG AAAAAAAAGT GATTCGTTGA ATACCGCCTA TTCCGCACAG
ATGACTAAGC TTGCAGCAGA ACATTCAGGT TTATTTATGA CAAAGGTGAT AAGTATGTTT
TTGTTTGATA ACAAAACAGC TGAAACCTTC TTTACCCCCG CAGAATTTAC AGATAAAGAA
TATGCAGCCG GCGATATGCT TCCATCAAAG GTTCAGGCAT ACTTTCAATA TTATGTTACT
CAGGATCTGT ATTCATGGAA AGCTGCAGCA GAAAAATTGA TTAATACTTG TCCTGCAGGT
TCAGATAACA GACAGGTATT TTATGCAAGT GTTATTCCCT TGTTTACGCA AAATGACCTG
GATTATGCTA AGGGCTTAAC AAATACATTT CTGAAAGAAT ATCCCAAATC AGCAGAAGCA
AAACAGTTAA AAGCAAGCAT GCCCAAAGGT GCATTATCCA TTGGAGAAGA GGTTCCTGAT
ATTACCCTTA CAGATATAAA CGGAAAAAGA CTTTCACTGA GTTCCTTAAA AGGTAAAGTG
GTTTTAATTG ATTTCTGGGC TTCGTGGTGT GGACCGTGCA GAGGGGAAAA CCCGAACGTT
GTGAATGCAT ACAATAAATA CAAAGAAAAA GGCTTTACTG TATTCAGTGT ATCGCTGGAT
ACCAACAAAG ATCAGTGGCA AGCCGCAATT AATAAAGACG GATTAGCCTG GCCAAATCAC
GTTTCAGATT TAAAAGGATG GAGTTCTGAT CCTGCAAAAT TATACAATGT TAAAGGTATA
CCGGCAACAT TTCTTATTGA TCAACAAGGT AAATTAATTG CAATGAATCT TCGTGGAGAA
GACTTGCAAG CGAAACTGGC AGAACTATTA AATAAACCTT AA
 
Protein sequence
MLSAVTAKPI SIKGKFTKTE TGYSTIYLYK YLGNAVYVFD STKYVNGAFE FKFNDVIPTG 
FYKIGFDKAD AITLVAGYES IVITGNPDIE RSMTITGSKE NDLFHEYQKI NKTQNAQNAI
LNQQAQQLQQ RPGMTEELFN IEIAGLRKKS DSLNTAYSAQ MTKLAAEHSG LFMTKVISMF
LFDNKTAETF FTPAEFTDKE YAAGDMLPSK VQAYFQYYVT QDLYSWKAAA EKLINTCPAG
SDNRQVFYAS VIPLFTQNDL DYAKGLTNTF LKEYPKSAEA KQLKASMPKG ALSIGEEVPD
ITLTDINGKR LSLSSLKGKV VLIDFWASWC GPCRGENPNV VNAYNKYKEK GFTVFSVSLD
TNKDQWQAAI NKDGLAWPNH VSDLKGWSSD PAKLYNVKGI PATFLIDQQG KLIAMNLRGE
DLQAKLAELL NKP