| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_3040 |
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| Symbol | rluA |
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| ID | 4183423 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 3482578 |
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| End bp | 3483300 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638073029 |
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| Product | pseudouridylate synthase |
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| Protein accession | YP_679623 |
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| Protein GI | 110639414 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.523078 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAAAGG TTGATATTAA GGATTTAATC ATTTTTGAAA ATGATGACTA TTTTTTTATC
AATAAACCTC CTTTTATTTC TTCTCTGGAT GAACGTACCG GCGGCGCTCC AAGCATTATA
CGGATGGCTA AGGAATACTG GCCTGACGCG CAGCTTTGCC ACCGGATAGA TAAGGAAACC
TCCGGTGTAC TGGCAGTGGC TAAAAACCCT GCCGCCTACA GGCATTTATC TATGGCATTT
GAATCCAGAA ATGTAACCAA GGAATACCAT GCAGTAGTAA ATGGAACACA TGATCTGGAT
GGGGTAGATG TCTACCTGCC GATTTTGGTG TTGCCTACCG GAACAGTCAA AATTGATAAA
TCAAAGGGGA AATTAGCAGA AACCATTTTC TTCACGATTC AGGCCTATAA AAAAGCAACA
CTCGTGCGTT GTTTACCAAT TACAGGCCGT ATGCACCAGA TCCGGATACA CCTCGCTACA
CTTGGTGCAT CGATTGTCGG GGATGAAACC TATGGCGGGA AGCCTCTCTT TCTTTCAGAA
ATTAAAAGAA AAAAATTTAA TTTGAAAAAA GATTCAGAGG AGCGTCCATT AATTCAGCGG
TTTGCGTTAC ACGCTAATTC TCTGATATTT ACAGATATGA ATGAGCAGAT TTTAGACATA
AAAGCACCGT ATCCCAAGGA TTTTGATGTG CTTGTAAAAA AATTAGAAGA GTATTCTTCA
TGA
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| Protein sequence | MKKVDIKDLI IFENDDYFFI NKPPFISSLD ERTGGAPSII RMAKEYWPDA QLCHRIDKET
SGVLAVAKNP AAYRHLSMAF ESRNVTKEYH AVVNGTHDLD GVDVYLPILV LPTGTVKIDK
SKGKLAETIF FTIQAYKKAT LVRCLPITGR MHQIRIHLAT LGASIVGDET YGGKPLFLSE
IKRKKFNLKK DSEERPLIQR FALHANSLIF TDMNEQILDI KAPYPKDFDV LVKKLEEYSS
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