Gene CHU_2992 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_2992 
Symbollon 
ID4185101 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp3428547 
End bp3430988 
Gene Length2442 bp 
Protein Length813 aa 
Translation table11 
GC content41% 
IMG OID638072981 
ProductATP-dependent protease La 
Protein accessionYP_679575 
Protein GI110639366 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0466] ATP-dependent Lon protease, bacterial type 
TIGRFAM ID[TIGR00763] ATP-dependent protease La 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAGATA CGGAGCCGGT AGATATGATT CCACTCATTA CCCCTGAAGA AGAGGCGGAG 
ATGGATAAAG AAGAATTCCC TTCTGTATTA CCAATATTAC CTGTTCGCAA TATAGTGCTA
TTCCCGGGTG TAGTGCTTCC CATTACTGTT GGCCGCCAGA AATCAATACG TCTGGTTAAG
AAGTTTTATA AAGGAGACCG CACCATTGGT GTTGTTGCGC AGGAAAACCA AAAGTCTGAA
GAACCAAGTT TTCAGGATAT ATTTAAAGTT GGTACAGTAG CCAAAATTCT CCGCATGTTT
GTATTGCCGG ATGGTAATAC AACGATTATT ATTCAGGGGA AAAGACGTTT TAAGATCGAA
GAGCAAGTTC AGGACGAACC GTTCATGCAG GCAAAGGTGA GTATGTTGAA AGACATTCAC
CCGGATATGA GCAAAAAAGA AGTGAAGGCA CTTCTGCAAT CTGTAAAAGA ATCGGCAACT
AAAATTCTGA AAATGAATCC TGAAATTCCA CAGGATGCAC AGATTGCCAT CAACAATATT
GAAAGTGAAA ATTTTCTGAC ACATTTCCTT TCTTCCAATA TCAATGCGGA ATTAAAGGAT
AAACAAAAGT TACTGGAGTT TGATGATGCG GTTGAACGTG CTACGTGGTT ATTACAGCTG
ATGGATAAAG ACATCCAGAT GCTGGAAATA AAACGCGAGA TTCATACCAA AGTGCATACC
GATATTGATC AGCAGCAGCG TGATTATTTC CTGCGTCAGC AGATCAAAGT ATTGCAGGAT
GAGCTTGGCG ACTTCAGTAG TGAGCAGGAG TTTGAGCGTT TAAAAGAAAA AGCATTAACA
AAAAAATGGT CGGATAAAGT ACGTGCGCAC TTTGATAAAG AAATGTCGAA GCTGCAGCGT
GTAAACCCGA TGGCACCGGA TTATCCGGTA ACATTTAATT ATTTAGAGTT GCTTGTTGAT
CTGCCGTGGG GCGAAAATTC GACCGATAAT TTTGATCTGG TACGTGCGAA AGAAATTTTA
GACGAAGATC ATTTTGGCTT GACCAAAGTG AAACAACGGA TACTGGAATA TCTGGCCGTA
TTGAAATTGA AAAATAACAT GAAGGCGCCG ATCCTTTGTT TATACGGTCC TCCGGGTGTT
GGTAAAACAT CGTTAGGGAA ATCCATAGCA AAAGCACTGG ACCGTAAATA CATTCGTATG
TCGTTAGGCG GCGTACACGA TGAATCAGAG ATCCGCGGTC ACCGTAAAAC GTACATAGGT
GCTATGCCCG GTAAAATCAT TCAGGGTATT AAACGCTCTG AAACATCCAA CCCGGTATTT
ATATTAGATG AAATAGATAA AATCTCGAAA GATTTCAGAG GTGATCCATC TTCCGCATTA
TTAGAAGTAC TGGATCCGGA ACAGAATTCT TCTTTCATGG ATAATTTCCT GGAAGTAGAA
TACGATCTGT CAAAAGTACT GTTCATTGCA ACCTCCAATG CGCTTGATAC CATACAGCCT
GCTTTGCGCG ACCGTATGGA GATCATAGAG ATTAACGGAT ATACACTGGA AGAAAAGATT
CAGATTGCGA AAAAATATTT AATTCCAAAG CAAAAGGAAG AACACGGCTT AAAAGCTAAA
GATATAAGCT TTACAGATGC TGCCATTGTA AAAATCATTG AAGACTACAC CAGAGAATCC
GGTGTACGTA ACTTAGAACG TAAAATTGGT GCGGTAGTGC GTAACATCGC CGTAGCTATC
GCCATGGAAA CGGCATATAC AAAGAAAATT CAGCCGGCAC AGGTACGTGA AATTTTAGGA
TCCGAAGATT TTGAAAAAGA TACGTATCAG CAGGATGATT TAGCCGGTAT TGTTACAGGT
CTTGCCTGGA CACCTTACGG CGGAGAGATC TTAACGATCG AATCCATCAT CAGTAAAGGA
AAAGGTAAGT TAACATTGTC TGGTCAGCTG GGTGATGTAA TGAAAGAGTC TGCATCGGCA
GCACTTTCTT TACTGCGCGC AAATGTAGAC GCTATCGGTA TTGATCACCG CGTATTTGAT
CATTTTGATC TGCACGTACA CGTACCTGCC GGTGCTACAC CTAAAGATGG CCCTTCAGCA
GGTATTGCCT TATATACATC ATTGGCGTCT ACGTTTACAC AGCGCAAGAT CAAACCGGCA
CTTGCCATGA CAGGAGAAAT TACCCTGCGT GGTAAAGTAT TGCCTGTTGG CGGGATCAAA
GAAAAAATCC TTGCGGCAAA ACGCGCAGGT ATCAAAGAAA TTATTTTAAG TAAAAAGAAT
AAAAAAGATA TCGAAGAAAT ACACCCGCCG GATATTGCAG ATCTTAAATT TCACTTTGTT
GAAACGGCAG ATGAAGTATT AGCCATTGCC TTATTAAAAC AGAAAATTAA AAAGCCTTTT
AACTTAGAGG TTCCGGAAGA ACCGAAAAAG AAAGACAAAT AA
 
Protein sequence
MLDTEPVDMI PLITPEEEAE MDKEEFPSVL PILPVRNIVL FPGVVLPITV GRQKSIRLVK 
KFYKGDRTIG VVAQENQKSE EPSFQDIFKV GTVAKILRMF VLPDGNTTII IQGKRRFKIE
EQVQDEPFMQ AKVSMLKDIH PDMSKKEVKA LLQSVKESAT KILKMNPEIP QDAQIAINNI
ESENFLTHFL SSNINAELKD KQKLLEFDDA VERATWLLQL MDKDIQMLEI KREIHTKVHT
DIDQQQRDYF LRQQIKVLQD ELGDFSSEQE FERLKEKALT KKWSDKVRAH FDKEMSKLQR
VNPMAPDYPV TFNYLELLVD LPWGENSTDN FDLVRAKEIL DEDHFGLTKV KQRILEYLAV
LKLKNNMKAP ILCLYGPPGV GKTSLGKSIA KALDRKYIRM SLGGVHDESE IRGHRKTYIG
AMPGKIIQGI KRSETSNPVF ILDEIDKISK DFRGDPSSAL LEVLDPEQNS SFMDNFLEVE
YDLSKVLFIA TSNALDTIQP ALRDRMEIIE INGYTLEEKI QIAKKYLIPK QKEEHGLKAK
DISFTDAAIV KIIEDYTRES GVRNLERKIG AVVRNIAVAI AMETAYTKKI QPAQVREILG
SEDFEKDTYQ QDDLAGIVTG LAWTPYGGEI LTIESIISKG KGKLTLSGQL GDVMKESASA
ALSLLRANVD AIGIDHRVFD HFDLHVHVPA GATPKDGPSA GIALYTSLAS TFTQRKIKPA
LAMTGEITLR GKVLPVGGIK EKILAAKRAG IKEIILSKKN KKDIEEIHPP DIADLKFHFV
ETADEVLAIA LLKQKIKKPF NLEVPEEPKK KDK