Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_2957 |
Symbol | |
ID | 4186342 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 3383113 |
End bp | 3388779 |
Gene Length | 5667 bp |
Protein Length | 1888 aa |
Translation table | 11 |
GC content | 28% |
IMG OID | 638072944 |
Product | hypothetical protein |
Protein accession | YP_679541 |
Protein GI | 110639332 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000786902 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.0000338005 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGTCACTCT CAAGTTTAAA CTCAGCACAT CAGGGATACG AGTATCAAGA TTTGTTAGTC GCTTACTTCA TATTAAAAGA AATAATTGAA GAACGAGACA GCAGCTTTTT TATTGATAAG AAAGAATACG ATGGAGATAC ATTTGATGAT TTAACTATTG AAAATAACAA TGGTTTTTTC AAAAAGCAAG TTAAATACAG TAATAGTTCT AACTCTCATA CTTTTGAAAA GAAAGACTTA TCTTCTGCAG CATATCAAAT AGCCCTTGAC AAACTATTTT TTTCATGGAA TAGTCATCCA AATAAGAGTA ACTGCTTTTT GAGATTGTGT TTAGCTTGGA ATGAACCTAT AGATGACCTT ACCAAAATTC TAAAAGAAGC AACAGAGGAA AAATCTTTTT CCAATTATAA TACTAAGCTA TTTCAAATTG ACATTGAAGA GTTTTGGCCT TTAAATGGTA ACCCTAAATC ATCATGGAAG AGGTTTAACA CTCAATCCCC AAATATTAAT CGAGCTGATT TTAATTCCTT CTTAAATAAC TTTACAATAG AATTAGAATG TCCTAAATCA AGTTCAGATT TTTATAGTGC AGGTGAATTA GAGAAGTTAG TTCTAAACTA CGTATCACAA TTAGGAATAG GCATTTTCCC AAATGAAAAT AAAACTAAAG AAGAGTTTGC ATTAGCACTT ATAGCCTTAG TACGGAAATT TCGAGGAACA GGCAAAAATA TAACCATATC GTATATTTTT GATTATTTCT CCATAAAGAC TGATTACGGG TCAATCAGGC AAATATTTCC TATCAACTAT TCACAAAATA TTGAACCAAA TAATTTTTGT AAATATATTT TAAACAAATT AGAGCAACAT TCTAAGGTTA TATTAACAGG AGAACCAGGA AGTGGTAAAT CATGGTTTAT TGAGAATTTC AAGAAATATT TAGAAGAGGA AAGTATAAAT GTAATTCGTC ATTTATGTTA TACAGATTTA GATGATATAC ATCAAAAAGA CAGAATAAAG CTTGATGTAT TTTACGGCAA CTTAATTAAT GACATTTTAG ATTGTTTCGG TGAATTAAAG CATAAAAAAG AAAAAAGGTA TGCAAGTACA TTAAGTGAAC TCAACAACCT CCTTTCCAAT ATCACAGAGA AAACCATCTT AATAGTTGAT GGCATTGACC ATATTGAGCG CATATTTCAA TTCAAAAGTT ATCCTGATAT ATCGAAAGTA GATATTGACA TTATCAATAA GATAAATGAA CTGAAAGTAT CAGAACACGT TAAAATTTTA ATTTCTTCTC AACCAATTTC TGATTTGGGA TTAATTAAAG GTTTTGTTTC AGAAACCATG CCTAAGTGGG AACAACTCGA AGTTGAATCG TATATGTCCA AGCTCCAATT GCAAGATACA GCATTGGAAG AAAATTATTC ATTATCAAAA TTTCTTTTTG ATAAAAGTAA AGGAAGCCCT CTTTACTTAA AGTATTTGAC TAATGAAGTA AAAAGGCTTA GTAGTTATAG CAAAGAAGAG TTAAATCAAC TACCTGAATA TTCTAATAAT CTAAAGGATT ATTATTGCTA CTTAATGTCA AAATTAAATC TGAGTGCAAA ACTTCCAAGG ATATTATCAG GTGTAAGTTT TAGTTTGACT AAAATTGAAT TACAGGAAAT AACAGGTGAT GGCAATTATA TAGACAAATC GTTAGTAGAC TTAGAACCTG TTCTCAAGCT TAATGTATCA CAAAACGGTT ATATAATATA TCATGAAAGC TTTAGAAGAT TTATAGTAGA GAACCTTTTA TCAGAAGGAG TTGACATCAG TTCAAATATA TTCAAACCAA TAATTGAATG GTTTGACAAA AAAGGGTTTT ACGAATACTC AAAATCTTTC CGATTTTATT TTCAGTTTCT CTATGAATTA AATGATGTTG AAACCATATC AAAATACATT TCAAAGGATT TTATTTCTAA GTCAGTATCG TTTGGACATT CATGGAAATC AATCTCAAAC AATTATAAAT ATCTGTTAAA ATCTGCACTA CAACAAAAAG ATTTTCCTAA AATAATTTTA TTGAATGAAC TTAATAAAAC ATTAAGCACT ACGGGGGATA TTCTCGACTC ACATTATGAA ACTTATTTAG ATGCTTTAGG TCATTTAAGG AGCTTTAAAT ACGTATCAGA ACATTTAAGT TTTGATGGAG CACCTACCCT ACCTTTACAA CAAGGATTAG CAGCTTGCTA CTTATGTCAC TCAAATGGCA CATCTTCTCC TTGGGAGGTT TACATTGATT TCTTTAAAGA AGGAGAATCT ATTGAAGTAG AATTATTTGG CTACTATATA AGATATTTAT TGATATGTGA AGATGAAAAA GAGATTCTCA AAATTGCGTC TCAGTTACAA TCAGATAATC TATCAAGCTA TTGCATTATT TTTCGTAAAG AGATAAATAG CTTTAGCAGC AACGATTTCA TTTCTAAGAT AAAAGCTGAA AGTAAAGATG TAAATGATAT TTTAAATTCG AAAAATAAAA TAGCTCAATC AGGAGACTTT GCACTTCTAA TAGACCAAAT AAAAAAATTC AGATATGTAC ACAATACTGA ACTACAAACG CTCAATACTT TTTTTCATAC AGTATTAACT AATAAGAATA ATGATACCTT AATCAATTAT ATAAGTGACT CTCTTAAAAA TTTAGGGTGG TTTTATGATT GGATAATATT TTCTTCTAAA ATTAAAATAG CTAAAACTAA CAATGAAATA AGCTTCAATG AGCTAAAAGA TATCTTTTTA ATATTAAAAC GTGAAACCTC TCCATTTAAA GGCCAGGTTA GAACATGTGA TTTACATATT CTTGAAAAGG AAATATACTT TTCTATCCAA GAAGGTCTAA TTTTATTAAA GAAAGAAAAT GAATGGTCTT GCATAATTGA CATATTGATT GACGTTAGTA ATAATACAAC TACTTTTTAT AGAAAAGAAC TTAGCGGCCC TCTTGATACT AATAGATTAT TTCAACTATT ATCAGAAAAT ACCAATAGTG AAAACATTAA TAAAATTACA GATACATTTG AAGCCATTAT AAAAGAAAAG CAAGAATATT ACCTTCATTC ATATATAGCT GATTATTATT TTCAATTATC AAAAATATAT TCTTTAAAAA AGGAAATAGA TACCGCTCTC CAAAAATTTG AAAAAGGAAT AGAATACCTA TTGGGATATA CCTCTTGGAA AGATTCAAGT GTAGACGATT TAACAGAATC AATAGTAGAT ATATATAAAA TTGATAATGC ATTAGGTAAT GAATACATAA AAAAATTAAA AATATTAATA GATTCAATAT CTAATCATAC TACAGGTAAG GGAACTAGTC ATTTTCCTGT TACGTGGTAT GATAGATTTT TAGAAATTAA CCCTTATGAT AGTGCTTTAT ATCTTCTTAA CTCTTTAGTT ACACCTATTA TTGATTGGAG ATTAGAAGAT TCGTTACAAA GCTTACTAAT ATCAGAGGAA AACAACGATA ACATTAACCC CCTAATTAAA TTATTTATTG CACAAACTTT TCCAATAGAA ACATCTGAAT CATATCTCTT AAATTGTATA GAAATTGCCC GTAAGTCTAA AGAATTAAAT TTTGAATTAG CAAAAAATTT TATCGCAATA ACTTCCAATA AAATTAATCA AAAATCTACG GAAGAATATT CAATTATTTT TTTAGATGCG CTTAAATCAG TATTTGAAGA ATTTGATTTA AGTAGTGATT TTAAAAATAT AAAGGTCAGG GAAAGTAATA AGCATTTTGC TAAAGATATT GATACTAATT TTGACTTTAA AAAAGACATA ATAGCAAGGA AAGAATTCTC TGAAATGCCT ATAGAAGAAT TAACTGACTT CATTTCGGAA AATGAACTGA CTATAAAAGA AGTAAATTCT CTATTATATC ATTTTGATTC AATTAATGTT GAACCAAATC ACTTTAAACA ACTTGTACAA TCATTTTTCT CTCAGACCCA CCTTTACAAG TCTAACGCAT TTGATGTTGG AATTCTATTT GAGAAGCCTA ATGATATGTC TATTTATTAT TGGACAGCGA GGTATGTATA TAATTTTAAT GGAAGTTATT CTTCATTATC AGACATTGAA GCCATTAAAA AAGCTTATAA TCTTGGAAAA GAAAAAAGCT TAGAGTTTTT ATGTGAACTT CTTTCGGACA AGTTAAATAT TCAGTACAGA AATGCCCTAT CAGCTAATCT TTTAAAGGGT CTAATAGAAG TAGGGTTTGA CTCAGATAAA ATAAAAGAAG CTTGGTTGAA TGCCTTTAAT ACTATTGACT ATAGATTACC CTCGAAAGAT GAATTTGATT GGGTTAAAGG ATTAGAAAAT GAATTAAACC TAAATATCGA AGAGATATTT ATCTGTATTC TTTTTTGTCG TTTTAAAGCA GCAACAACTG AACGTACCCA TGCTACTTTA TCAGCTATAT GGTATTTACT CTCTTGTTAT CCTGATAAAA TGATAAAACC ATTAAAATGG TTTATTAAAA ACAGAGATAA TTTTCTTGAA GCAAATCTAC TTTTGGTTAT AGAATTACTG TATGAATATG ATAAACAGGA TTCGAATTAC AAAAAACATT TCGTTACAGA AATAGAGAAA ATATATCCAA CAAACTACTT GTTGATTGAT ATGATTATTG AAAAATTACA TGGTAAAAGT AAACGGACTT TTCTTGTAAA TTCTAATACA ATTATATATC CATCTACTTT AATTAAAGAA GAATTTTTAT TTTTCTTAAA ACTCAATTTT AGAAACTATA GTATTTATAA AGCAGGAATA AACCTAAGCA ATTTATTTGA AAAGTATAGG GCTACTTTTA GGAATAAGTA TGAAGACGTT CTTGAACTGT ACTCTAACCG AGTATATAAA AAAATGGCTT CTCACATCCA TTCTTCTAAT TATTTTTTAG AGTTAGTCAA TAAAGACTTA TATAGGGATA TTTACAAATT TAAAGGGGAA GATATTATTG TAGAAGATTT AAAAGTAAAC ACATCCAAAC TTATAGCACA ATTCTTATCA AGAACAAGTA GACCTGTTAA ATTGCCCTTA CCATCCACTT TAGAAAAAGA TTTTATATCA TTGACAGTAA CTGATAATCA AGAATGGATA AGAATCGGCT ATTATGAAAG TGAATTATTA GAAAAAAGTC ATGGAGAGCT TCAAGAATAT AAAGTGTATG GAGGCATTAA CTTTGCTAAA GAATTAAGTA ATTCTATTCC TTTAACAATA TCTGATTTGG ATGGTAATGA GTATATAAAA GAAGAAAATG AATCGCTAAC CAGCATTATA CTTCAACATG ACCCATTGGA AGAATATAAA ATATTGTGGC TTAGCGAGGA CTTATTCGAG TTTCTTGAGT TGAAAATTTG TGATATAATT GAAGGATTAT TTGCAAGAAA TTCCACGAAT GATGTGGTCT TAAAGTACAA TTATTGGAGT TCGGATTACA TAAATTTAGG ATACAGTGAT AGTATTGAAT GCGAAATACC TAAACACGAG GGAGCAGAGT TATTAATCCG AGCGGATTAT TTTAAAAAAA TTTGTGAATT GTATGAGAAT ATTCCTCACT ACATAACATA TAGAATATCT CCTAAAGACA CAGATAATTA TGAGTAA
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Protein sequence | MSLSSLNSAH QGYEYQDLLV AYFILKEIIE ERDSSFFIDK KEYDGDTFDD LTIENNNGFF KKQVKYSNSS NSHTFEKKDL SSAAYQIALD KLFFSWNSHP NKSNCFLRLC LAWNEPIDDL TKILKEATEE KSFSNYNTKL FQIDIEEFWP LNGNPKSSWK RFNTQSPNIN RADFNSFLNN FTIELECPKS SSDFYSAGEL EKLVLNYVSQ LGIGIFPNEN KTKEEFALAL IALVRKFRGT GKNITISYIF DYFSIKTDYG SIRQIFPINY SQNIEPNNFC KYILNKLEQH SKVILTGEPG SGKSWFIENF KKYLEEESIN VIRHLCYTDL DDIHQKDRIK LDVFYGNLIN DILDCFGELK HKKEKRYAST LSELNNLLSN ITEKTILIVD GIDHIERIFQ FKSYPDISKV DIDIINKINE LKVSEHVKIL ISSQPISDLG LIKGFVSETM PKWEQLEVES YMSKLQLQDT ALEENYSLSK FLFDKSKGSP LYLKYLTNEV KRLSSYSKEE LNQLPEYSNN LKDYYCYLMS KLNLSAKLPR ILSGVSFSLT KIELQEITGD GNYIDKSLVD LEPVLKLNVS QNGYIIYHES FRRFIVENLL SEGVDISSNI FKPIIEWFDK KGFYEYSKSF RFYFQFLYEL NDVETISKYI SKDFISKSVS FGHSWKSISN NYKYLLKSAL QQKDFPKIIL LNELNKTLST TGDILDSHYE TYLDALGHLR SFKYVSEHLS FDGAPTLPLQ QGLAACYLCH SNGTSSPWEV YIDFFKEGES IEVELFGYYI RYLLICEDEK EILKIASQLQ SDNLSSYCII FRKEINSFSS NDFISKIKAE SKDVNDILNS KNKIAQSGDF ALLIDQIKKF RYVHNTELQT LNTFFHTVLT NKNNDTLINY ISDSLKNLGW FYDWIIFSSK IKIAKTNNEI SFNELKDIFL ILKRETSPFK GQVRTCDLHI LEKEIYFSIQ EGLILLKKEN EWSCIIDILI DVSNNTTTFY RKELSGPLDT NRLFQLLSEN TNSENINKIT DTFEAIIKEK QEYYLHSYIA DYYFQLSKIY SLKKEIDTAL QKFEKGIEYL LGYTSWKDSS VDDLTESIVD IYKIDNALGN EYIKKLKILI DSISNHTTGK GTSHFPVTWY DRFLEINPYD SALYLLNSLV TPIIDWRLED SLQSLLISEE NNDNINPLIK LFIAQTFPIE TSESYLLNCI EIARKSKELN FELAKNFIAI TSNKINQKST EEYSIIFLDA LKSVFEEFDL SSDFKNIKVR ESNKHFAKDI DTNFDFKKDI IARKEFSEMP IEELTDFISE NELTIKEVNS LLYHFDSINV EPNHFKQLVQ SFFSQTHLYK SNAFDVGILF EKPNDMSIYY WTARYVYNFN GSYSSLSDIE AIKKAYNLGK EKSLEFLCEL LSDKLNIQYR NALSANLLKG LIEVGFDSDK IKEAWLNAFN TIDYRLPSKD EFDWVKGLEN ELNLNIEEIF ICILFCRFKA ATTERTHATL SAIWYLLSCY PDKMIKPLKW FIKNRDNFLE ANLLLVIELL YEYDKQDSNY KKHFVTEIEK IYPTNYLLID MIIEKLHGKS KRTFLVNSNT IIYPSTLIKE EFLFFLKLNF RNYSIYKAGI NLSNLFEKYR ATFRNKYEDV LELYSNRVYK KMASHIHSSN YFLELVNKDL YRDIYKFKGE DIIVEDLKVN TSKLIAQFLS RTSRPVKLPL PSTLEKDFIS LTVTDNQEWI RIGYYESELL EKSHGELQEY KVYGGINFAK ELSNSIPLTI SDLDGNEYIK EENESLTSII LQHDPLEEYK ILWLSEDLFE FLELKICDII EGLFARNSTN DVVLKYNYWS SDYINLGYSD SIECEIPKHE GAELLIRADY FKKICELYEN IPHYITYRIS PKDTDNYE
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