Gene CHU_2957 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_2957 
Symbol 
ID4186342 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp3383113 
End bp3388779 
Gene Length5667 bp 
Protein Length1888 aa 
Translation table11 
GC content28% 
IMG OID638072944 
Producthypothetical protein 
Protein accessionYP_679541 
Protein GI110639332 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000786902 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000338005 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGTCACTCT CAAGTTTAAA CTCAGCACAT CAGGGATACG AGTATCAAGA TTTGTTAGTC 
GCTTACTTCA TATTAAAAGA AATAATTGAA GAACGAGACA GCAGCTTTTT TATTGATAAG
AAAGAATACG ATGGAGATAC ATTTGATGAT TTAACTATTG AAAATAACAA TGGTTTTTTC
AAAAAGCAAG TTAAATACAG TAATAGTTCT AACTCTCATA CTTTTGAAAA GAAAGACTTA
TCTTCTGCAG CATATCAAAT AGCCCTTGAC AAACTATTTT TTTCATGGAA TAGTCATCCA
AATAAGAGTA ACTGCTTTTT GAGATTGTGT TTAGCTTGGA ATGAACCTAT AGATGACCTT
ACCAAAATTC TAAAAGAAGC AACAGAGGAA AAATCTTTTT CCAATTATAA TACTAAGCTA
TTTCAAATTG ACATTGAAGA GTTTTGGCCT TTAAATGGTA ACCCTAAATC ATCATGGAAG
AGGTTTAACA CTCAATCCCC AAATATTAAT CGAGCTGATT TTAATTCCTT CTTAAATAAC
TTTACAATAG AATTAGAATG TCCTAAATCA AGTTCAGATT TTTATAGTGC AGGTGAATTA
GAGAAGTTAG TTCTAAACTA CGTATCACAA TTAGGAATAG GCATTTTCCC AAATGAAAAT
AAAACTAAAG AAGAGTTTGC ATTAGCACTT ATAGCCTTAG TACGGAAATT TCGAGGAACA
GGCAAAAATA TAACCATATC GTATATTTTT GATTATTTCT CCATAAAGAC TGATTACGGG
TCAATCAGGC AAATATTTCC TATCAACTAT TCACAAAATA TTGAACCAAA TAATTTTTGT
AAATATATTT TAAACAAATT AGAGCAACAT TCTAAGGTTA TATTAACAGG AGAACCAGGA
AGTGGTAAAT CATGGTTTAT TGAGAATTTC AAGAAATATT TAGAAGAGGA AAGTATAAAT
GTAATTCGTC ATTTATGTTA TACAGATTTA GATGATATAC ATCAAAAAGA CAGAATAAAG
CTTGATGTAT TTTACGGCAA CTTAATTAAT GACATTTTAG ATTGTTTCGG TGAATTAAAG
CATAAAAAAG AAAAAAGGTA TGCAAGTACA TTAAGTGAAC TCAACAACCT CCTTTCCAAT
ATCACAGAGA AAACCATCTT AATAGTTGAT GGCATTGACC ATATTGAGCG CATATTTCAA
TTCAAAAGTT ATCCTGATAT ATCGAAAGTA GATATTGACA TTATCAATAA GATAAATGAA
CTGAAAGTAT CAGAACACGT TAAAATTTTA ATTTCTTCTC AACCAATTTC TGATTTGGGA
TTAATTAAAG GTTTTGTTTC AGAAACCATG CCTAAGTGGG AACAACTCGA AGTTGAATCG
TATATGTCCA AGCTCCAATT GCAAGATACA GCATTGGAAG AAAATTATTC ATTATCAAAA
TTTCTTTTTG ATAAAAGTAA AGGAAGCCCT CTTTACTTAA AGTATTTGAC TAATGAAGTA
AAAAGGCTTA GTAGTTATAG CAAAGAAGAG TTAAATCAAC TACCTGAATA TTCTAATAAT
CTAAAGGATT ATTATTGCTA CTTAATGTCA AAATTAAATC TGAGTGCAAA ACTTCCAAGG
ATATTATCAG GTGTAAGTTT TAGTTTGACT AAAATTGAAT TACAGGAAAT AACAGGTGAT
GGCAATTATA TAGACAAATC GTTAGTAGAC TTAGAACCTG TTCTCAAGCT TAATGTATCA
CAAAACGGTT ATATAATATA TCATGAAAGC TTTAGAAGAT TTATAGTAGA GAACCTTTTA
TCAGAAGGAG TTGACATCAG TTCAAATATA TTCAAACCAA TAATTGAATG GTTTGACAAA
AAAGGGTTTT ACGAATACTC AAAATCTTTC CGATTTTATT TTCAGTTTCT CTATGAATTA
AATGATGTTG AAACCATATC AAAATACATT TCAAAGGATT TTATTTCTAA GTCAGTATCG
TTTGGACATT CATGGAAATC AATCTCAAAC AATTATAAAT ATCTGTTAAA ATCTGCACTA
CAACAAAAAG ATTTTCCTAA AATAATTTTA TTGAATGAAC TTAATAAAAC ATTAAGCACT
ACGGGGGATA TTCTCGACTC ACATTATGAA ACTTATTTAG ATGCTTTAGG TCATTTAAGG
AGCTTTAAAT ACGTATCAGA ACATTTAAGT TTTGATGGAG CACCTACCCT ACCTTTACAA
CAAGGATTAG CAGCTTGCTA CTTATGTCAC TCAAATGGCA CATCTTCTCC TTGGGAGGTT
TACATTGATT TCTTTAAAGA AGGAGAATCT ATTGAAGTAG AATTATTTGG CTACTATATA
AGATATTTAT TGATATGTGA AGATGAAAAA GAGATTCTCA AAATTGCGTC TCAGTTACAA
TCAGATAATC TATCAAGCTA TTGCATTATT TTTCGTAAAG AGATAAATAG CTTTAGCAGC
AACGATTTCA TTTCTAAGAT AAAAGCTGAA AGTAAAGATG TAAATGATAT TTTAAATTCG
AAAAATAAAA TAGCTCAATC AGGAGACTTT GCACTTCTAA TAGACCAAAT AAAAAAATTC
AGATATGTAC ACAATACTGA ACTACAAACG CTCAATACTT TTTTTCATAC AGTATTAACT
AATAAGAATA ATGATACCTT AATCAATTAT ATAAGTGACT CTCTTAAAAA TTTAGGGTGG
TTTTATGATT GGATAATATT TTCTTCTAAA ATTAAAATAG CTAAAACTAA CAATGAAATA
AGCTTCAATG AGCTAAAAGA TATCTTTTTA ATATTAAAAC GTGAAACCTC TCCATTTAAA
GGCCAGGTTA GAACATGTGA TTTACATATT CTTGAAAAGG AAATATACTT TTCTATCCAA
GAAGGTCTAA TTTTATTAAA GAAAGAAAAT GAATGGTCTT GCATAATTGA CATATTGATT
GACGTTAGTA ATAATACAAC TACTTTTTAT AGAAAAGAAC TTAGCGGCCC TCTTGATACT
AATAGATTAT TTCAACTATT ATCAGAAAAT ACCAATAGTG AAAACATTAA TAAAATTACA
GATACATTTG AAGCCATTAT AAAAGAAAAG CAAGAATATT ACCTTCATTC ATATATAGCT
GATTATTATT TTCAATTATC AAAAATATAT TCTTTAAAAA AGGAAATAGA TACCGCTCTC
CAAAAATTTG AAAAAGGAAT AGAATACCTA TTGGGATATA CCTCTTGGAA AGATTCAAGT
GTAGACGATT TAACAGAATC AATAGTAGAT ATATATAAAA TTGATAATGC ATTAGGTAAT
GAATACATAA AAAAATTAAA AATATTAATA GATTCAATAT CTAATCATAC TACAGGTAAG
GGAACTAGTC ATTTTCCTGT TACGTGGTAT GATAGATTTT TAGAAATTAA CCCTTATGAT
AGTGCTTTAT ATCTTCTTAA CTCTTTAGTT ACACCTATTA TTGATTGGAG ATTAGAAGAT
TCGTTACAAA GCTTACTAAT ATCAGAGGAA AACAACGATA ACATTAACCC CCTAATTAAA
TTATTTATTG CACAAACTTT TCCAATAGAA ACATCTGAAT CATATCTCTT AAATTGTATA
GAAATTGCCC GTAAGTCTAA AGAATTAAAT TTTGAATTAG CAAAAAATTT TATCGCAATA
ACTTCCAATA AAATTAATCA AAAATCTACG GAAGAATATT CAATTATTTT TTTAGATGCG
CTTAAATCAG TATTTGAAGA ATTTGATTTA AGTAGTGATT TTAAAAATAT AAAGGTCAGG
GAAAGTAATA AGCATTTTGC TAAAGATATT GATACTAATT TTGACTTTAA AAAAGACATA
ATAGCAAGGA AAGAATTCTC TGAAATGCCT ATAGAAGAAT TAACTGACTT CATTTCGGAA
AATGAACTGA CTATAAAAGA AGTAAATTCT CTATTATATC ATTTTGATTC AATTAATGTT
GAACCAAATC ACTTTAAACA ACTTGTACAA TCATTTTTCT CTCAGACCCA CCTTTACAAG
TCTAACGCAT TTGATGTTGG AATTCTATTT GAGAAGCCTA ATGATATGTC TATTTATTAT
TGGACAGCGA GGTATGTATA TAATTTTAAT GGAAGTTATT CTTCATTATC AGACATTGAA
GCCATTAAAA AAGCTTATAA TCTTGGAAAA GAAAAAAGCT TAGAGTTTTT ATGTGAACTT
CTTTCGGACA AGTTAAATAT TCAGTACAGA AATGCCCTAT CAGCTAATCT TTTAAAGGGT
CTAATAGAAG TAGGGTTTGA CTCAGATAAA ATAAAAGAAG CTTGGTTGAA TGCCTTTAAT
ACTATTGACT ATAGATTACC CTCGAAAGAT GAATTTGATT GGGTTAAAGG ATTAGAAAAT
GAATTAAACC TAAATATCGA AGAGATATTT ATCTGTATTC TTTTTTGTCG TTTTAAAGCA
GCAACAACTG AACGTACCCA TGCTACTTTA TCAGCTATAT GGTATTTACT CTCTTGTTAT
CCTGATAAAA TGATAAAACC ATTAAAATGG TTTATTAAAA ACAGAGATAA TTTTCTTGAA
GCAAATCTAC TTTTGGTTAT AGAATTACTG TATGAATATG ATAAACAGGA TTCGAATTAC
AAAAAACATT TCGTTACAGA AATAGAGAAA ATATATCCAA CAAACTACTT GTTGATTGAT
ATGATTATTG AAAAATTACA TGGTAAAAGT AAACGGACTT TTCTTGTAAA TTCTAATACA
ATTATATATC CATCTACTTT AATTAAAGAA GAATTTTTAT TTTTCTTAAA ACTCAATTTT
AGAAACTATA GTATTTATAA AGCAGGAATA AACCTAAGCA ATTTATTTGA AAAGTATAGG
GCTACTTTTA GGAATAAGTA TGAAGACGTT CTTGAACTGT ACTCTAACCG AGTATATAAA
AAAATGGCTT CTCACATCCA TTCTTCTAAT TATTTTTTAG AGTTAGTCAA TAAAGACTTA
TATAGGGATA TTTACAAATT TAAAGGGGAA GATATTATTG TAGAAGATTT AAAAGTAAAC
ACATCCAAAC TTATAGCACA ATTCTTATCA AGAACAAGTA GACCTGTTAA ATTGCCCTTA
CCATCCACTT TAGAAAAAGA TTTTATATCA TTGACAGTAA CTGATAATCA AGAATGGATA
AGAATCGGCT ATTATGAAAG TGAATTATTA GAAAAAAGTC ATGGAGAGCT TCAAGAATAT
AAAGTGTATG GAGGCATTAA CTTTGCTAAA GAATTAAGTA ATTCTATTCC TTTAACAATA
TCTGATTTGG ATGGTAATGA GTATATAAAA GAAGAAAATG AATCGCTAAC CAGCATTATA
CTTCAACATG ACCCATTGGA AGAATATAAA ATATTGTGGC TTAGCGAGGA CTTATTCGAG
TTTCTTGAGT TGAAAATTTG TGATATAATT GAAGGATTAT TTGCAAGAAA TTCCACGAAT
GATGTGGTCT TAAAGTACAA TTATTGGAGT TCGGATTACA TAAATTTAGG ATACAGTGAT
AGTATTGAAT GCGAAATACC TAAACACGAG GGAGCAGAGT TATTAATCCG AGCGGATTAT
TTTAAAAAAA TTTGTGAATT GTATGAGAAT ATTCCTCACT ACATAACATA TAGAATATCT
CCTAAAGACA CAGATAATTA TGAGTAA
 
Protein sequence
MSLSSLNSAH QGYEYQDLLV AYFILKEIIE ERDSSFFIDK KEYDGDTFDD LTIENNNGFF 
KKQVKYSNSS NSHTFEKKDL SSAAYQIALD KLFFSWNSHP NKSNCFLRLC LAWNEPIDDL
TKILKEATEE KSFSNYNTKL FQIDIEEFWP LNGNPKSSWK RFNTQSPNIN RADFNSFLNN
FTIELECPKS SSDFYSAGEL EKLVLNYVSQ LGIGIFPNEN KTKEEFALAL IALVRKFRGT
GKNITISYIF DYFSIKTDYG SIRQIFPINY SQNIEPNNFC KYILNKLEQH SKVILTGEPG
SGKSWFIENF KKYLEEESIN VIRHLCYTDL DDIHQKDRIK LDVFYGNLIN DILDCFGELK
HKKEKRYAST LSELNNLLSN ITEKTILIVD GIDHIERIFQ FKSYPDISKV DIDIINKINE
LKVSEHVKIL ISSQPISDLG LIKGFVSETM PKWEQLEVES YMSKLQLQDT ALEENYSLSK
FLFDKSKGSP LYLKYLTNEV KRLSSYSKEE LNQLPEYSNN LKDYYCYLMS KLNLSAKLPR
ILSGVSFSLT KIELQEITGD GNYIDKSLVD LEPVLKLNVS QNGYIIYHES FRRFIVENLL
SEGVDISSNI FKPIIEWFDK KGFYEYSKSF RFYFQFLYEL NDVETISKYI SKDFISKSVS
FGHSWKSISN NYKYLLKSAL QQKDFPKIIL LNELNKTLST TGDILDSHYE TYLDALGHLR
SFKYVSEHLS FDGAPTLPLQ QGLAACYLCH SNGTSSPWEV YIDFFKEGES IEVELFGYYI
RYLLICEDEK EILKIASQLQ SDNLSSYCII FRKEINSFSS NDFISKIKAE SKDVNDILNS
KNKIAQSGDF ALLIDQIKKF RYVHNTELQT LNTFFHTVLT NKNNDTLINY ISDSLKNLGW
FYDWIIFSSK IKIAKTNNEI SFNELKDIFL ILKRETSPFK GQVRTCDLHI LEKEIYFSIQ
EGLILLKKEN EWSCIIDILI DVSNNTTTFY RKELSGPLDT NRLFQLLSEN TNSENINKIT
DTFEAIIKEK QEYYLHSYIA DYYFQLSKIY SLKKEIDTAL QKFEKGIEYL LGYTSWKDSS
VDDLTESIVD IYKIDNALGN EYIKKLKILI DSISNHTTGK GTSHFPVTWY DRFLEINPYD
SALYLLNSLV TPIIDWRLED SLQSLLISEE NNDNINPLIK LFIAQTFPIE TSESYLLNCI
EIARKSKELN FELAKNFIAI TSNKINQKST EEYSIIFLDA LKSVFEEFDL SSDFKNIKVR
ESNKHFAKDI DTNFDFKKDI IARKEFSEMP IEELTDFISE NELTIKEVNS LLYHFDSINV
EPNHFKQLVQ SFFSQTHLYK SNAFDVGILF EKPNDMSIYY WTARYVYNFN GSYSSLSDIE
AIKKAYNLGK EKSLEFLCEL LSDKLNIQYR NALSANLLKG LIEVGFDSDK IKEAWLNAFN
TIDYRLPSKD EFDWVKGLEN ELNLNIEEIF ICILFCRFKA ATTERTHATL SAIWYLLSCY
PDKMIKPLKW FIKNRDNFLE ANLLLVIELL YEYDKQDSNY KKHFVTEIEK IYPTNYLLID
MIIEKLHGKS KRTFLVNSNT IIYPSTLIKE EFLFFLKLNF RNYSIYKAGI NLSNLFEKYR
ATFRNKYEDV LELYSNRVYK KMASHIHSSN YFLELVNKDL YRDIYKFKGE DIIVEDLKVN
TSKLIAQFLS RTSRPVKLPL PSTLEKDFIS LTVTDNQEWI RIGYYESELL EKSHGELQEY
KVYGGINFAK ELSNSIPLTI SDLDGNEYIK EENESLTSII LQHDPLEEYK ILWLSEDLFE
FLELKICDII EGLFARNSTN DVVLKYNYWS SDYINLGYSD SIECEIPKHE GAELLIRADY
FKKICELYEN IPHYITYRIS PKDTDNYE