Gene CHU_2954 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_2954 
Symbol 
ID4185595 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp3379035 
End bp3379442 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content25% 
IMG OID638072941 
Producthypothetical protein 
Protein accessionYP_679538 
Protein GI110639329 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000017576 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000451115 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGTCAAAAA ATAAAAATAT TGGGAATCAC AAAATCAGTC AAATTAAATT AATGAAAGGG 
TATAGCAAAA TGGAATTAGA TATGAAAAAA GAAATTTTGT TGACGTTTAC GCAATTCTTT
TTGACTTATG CTGACAAGTA TGAAGTTGTA GAATGTAGAA CAAATTATAG GAGATATTTT
TCTATAATTT GTTCTGATAA AATTGTTGAA GTAACACTAT CAATAAATAA AATAAATAAT
GAGTGGACAG TTTGTGAATA TGGGTGTACA GAACTTTCAA TTAATTCAGT TGATGAGTTA
AGATTGAAAA TATTATCCAT ATTAAAATTA AAACAACCAC ATTTTTTCAG AAAGAAAAAA
ATTGAAACAC TTTTAGCTGA ATACAATATA AAACAGAACA AGATATGA
 
Protein sequence
MSKNKNIGNH KISQIKLMKG YSKMELDMKK EILLTFTQFF LTYADKYEVV ECRTNYRRYF 
SIICSDKIVE VTLSINKINN EWTVCEYGCT ELSINSVDEL RLKILSILKL KQPHFFRKKK
IETLLAEYNI KQNKI