Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_2941 |
Symbol | |
ID | 4185582 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 3363101 |
End bp | 3365452 |
Gene Length | 2352 bp |
Protein Length | 783 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 638072928 |
Product | restriction/modification methyltransferase |
Protein accession | YP_679525 |
Protein GI | 110639316 |
COG category | [V] Defense mechanisms |
COG ID | [COG0286] Type I restriction-modification system methyltransferase subunit |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0329699 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAATCAGG CAGTACACAA TAAACTAGTA TCCTTTATTT GGTCTATCGC AGACGATTGT TTGCGTGATG TATATGTACG AGGGAAGTAC CGGGATGTGA TTTTGCCCAT GGTGGTATTG AGGAGATTAG ACGCACTCCT TGAACCAACC AAAGATGCTG TATTGGAAGA GATGGCTTTT CAGAAAGATG AAGCCAAGTT TACAGAGTGG GATGAAAATG GATTGCGCCA GGCAAGTGGT TATGTCTTTT ACAATACGAG CGAATGGACG TTGCAAAGGC TACACGATAC GGCAACCAAT AATCAACAAA TTCTTCAGGC TAATTTTGAA GACTATTTAA AAGGGTATAG TGGCAACGTA AAAGAGATCA TTGAGAAATT TAATCTTAAA AGGCAAGTTC AGCACATGGC ATCGAAAGAT GTTTTGTTGA ATGTATTAGA GAAATTTACT TCGTCGTATA TCAATCTTAC TCCTTTTGAA AAAAATGATC CTGATGGAAG AAAGCTTCCG CCCTTAAGCA ATCTTGGGAT GGGTTATGTG TTTGAAGAAC TGATCCGTAA ATTCAATGAA GACAATAACG AAGAAGCTGG GGAGCACTTT ACACCGCGCG AAGTAATTGA TTTGATGACG CATATTATTT TTGAACCCAT CAAAGACAAA CTTCCTCCGG TAATGACCAT TTACGATCCT GCCTGTGGAA GCGGTGGTAT GCTTACAGAA TCACAGAATT TTATCAAGGA TGAAGATGGT GAAATAAAAG CTAAAGGAGA TGTGTATTTG TACGGCAAGG AAATCAATGA TGAAACCTAT GCCATTTGCA AATCAGATAT GATGATTAAG GGGAATAACC CTGAAAACAT TCGTGTAGGT TCTACGCTTT CAACCAATGA ATTTGCTGGT ACTACGTTTG ATTTTATGCT TTCCAATCCG CCCTATGGTA AGTCCTGGGC GAGTGAGCAA AAGTTTATAA AAGATGGGAA AGATATTATT GATCCTCGTT TTAAAATCAA GCTTCAAAAC TATTGGGGAA TTGAAGAAGA AGCAGATGCC ACACCACGCT CTTCAGATGG GCAATTACTT TTCCTGATGG AAATGGTGAA TAAAATGAAA CCGCTTTCTC AAAGTAAATT GGGCTCGCGC ATTGCATCGG TGCATAATGG TAGTAGTTTG TTTACAGGTG ATGCCGGTGG AGGCGAAAGC AATATCCGCA GGTATATTAT TGAAAACGAT TGGTTGGAAG CCATTGTGCA AATGCCGAAT AACTTGTTTT ACAATACGGG TATCACTACC TATATCTGGA TTTTAAGCAA CAACAAATCG AACAAAAGAA AAGGCAAGGT GCAGTTGATT GATGCCGGTT TTATGTTCCG TAAACTGCGT AAAAACTTAG GAAATAAAAA CTGTGAGTTT GCTCCCGAGC ACATACGCGA GATCGTATCT GTCTACGAGA AGATGCAGGC TGTTGACCGA AAGGTTGATG ATGAACAAGG GATTTCTTCA AAAGTTTTTG ATAACACAGA TTTTGGATAT TACAAAGTTA CCATTGAACG ACCAAAACGT TTGAAAGCAC AATTCACAGC TGAACGTATT GAAGAACTTC GTTTTGATAA AACCCTGCGC GAACCGATGG CCTGGGCCTA CGAAACGTAT AGGGAAAAAG TATATACCGA AATTGCCAAA CATGAAAAGG CAATTATTGA GTGGTGCGAA AAAAATGAGT TAAACTTAAA TGCCAAGCAA ACTAAGACAC TTGTAACTCA AGCTACCTGG CAAAAACAGT TGGACCTGGT AACACTTGCT ATGGATCTAA TGAAAAAAAT AGGATCGAAA GAGTTCAATG ATTTTAATCT TTTTAAAGAA AGGGTAGACG AAGCATTAGC CGCAAAAAAA CTAAAGCTTT CTTCTTCTGA AAAAAATGCG ATTCTGAATG CAGTTAGCTG GTATGATGCA GATGCTGAAA AGGTGGTAAA AGGAACAACG AAATTAGCAG GCGATAAACT AAAAGAACTG CTTGCCTATT TGGGTTGCAA AGAAAAAGAA TTGGGTGATT ACGGTTACTT TGCAACGGAG AAAAAAGGCG AATACCTGGA ATACGAAACA GAAAGTAATT TGCGTGATAC CGAAAATGTA CCGCTGAAAG AGGCTATTTA TACCTACTTT TTGCGTGAAG TAAAACCACA TGTAGGCGAA GCCTGGATCA ATTTAGATGC TACCAAAATC GGATATGAAA TAAGTTTTAA TAAATATTTC TATAAGCATA AACCCTTACG AAGCATTGAA GATGTTACGG CAGACATCCT GGCCTTGGAA AAGGAAAGCG ATGGACTGAT TGCAGAAATT TTAGGATTGT AA
|
Protein sequence | MNQAVHNKLV SFIWSIADDC LRDVYVRGKY RDVILPMVVL RRLDALLEPT KDAVLEEMAF QKDEAKFTEW DENGLRQASG YVFYNTSEWT LQRLHDTATN NQQILQANFE DYLKGYSGNV KEIIEKFNLK RQVQHMASKD VLLNVLEKFT SSYINLTPFE KNDPDGRKLP PLSNLGMGYV FEELIRKFNE DNNEEAGEHF TPREVIDLMT HIIFEPIKDK LPPVMTIYDP ACGSGGMLTE SQNFIKDEDG EIKAKGDVYL YGKEINDETY AICKSDMMIK GNNPENIRVG STLSTNEFAG TTFDFMLSNP PYGKSWASEQ KFIKDGKDII DPRFKIKLQN YWGIEEEADA TPRSSDGQLL FLMEMVNKMK PLSQSKLGSR IASVHNGSSL FTGDAGGGES NIRRYIIEND WLEAIVQMPN NLFYNTGITT YIWILSNNKS NKRKGKVQLI DAGFMFRKLR KNLGNKNCEF APEHIREIVS VYEKMQAVDR KVDDEQGISS KVFDNTDFGY YKVTIERPKR LKAQFTAERI EELRFDKTLR EPMAWAYETY REKVYTEIAK HEKAIIEWCE KNELNLNAKQ TKTLVTQATW QKQLDLVTLA MDLMKKIGSK EFNDFNLFKE RVDEALAAKK LKLSSSEKNA ILNAVSWYDA DAEKVVKGTT KLAGDKLKEL LAYLGCKEKE LGDYGYFATE KKGEYLEYET ESNLRDTENV PLKEAIYTYF LREVKPHVGE AWINLDATKI GYEISFNKYF YKHKPLRSIE DVTADILALE KESDGLIAEI LGL
|
| |