| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_2939 |
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| Symbol | hsdS |
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| ID | 4185580 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 3360658 |
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| End bp | 3361956 |
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| Gene Length | 1299 bp |
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| Protein Length | 432 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 638072926 |
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| Product | type I restriction-modification system |
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| Protein accession | YP_679523 |
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| Protein GI | 110639314 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0732] Restriction endonuclease S subunits |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0304782 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACTA AACTACAAAA ATATCCTGCA TACAAAGATT CGGGTGTGGA ATGGTTGGGT
GAGATACCGA AGCATTGGGA ATGTATTCGG ATGAAACATT TGTTCAGAGA TTATTCTGAA
AAAAATAAAC AGAATGAAGA ATTGCTGTCC GTTACACAAA ATCAAGGTGT TGTTCCTAGG
AGTTGGGTAG AAAGTAGAAT GGTTATGCCG TCTGGCGCAT TAGAGTCTTT TAAGTTTATA
CAAAAAGGCG ATTTTGCTAT AAGCTTAAGG TCGTTTGAGG GTGGTTTAGA GTATTGCCAT
CATGATGGTA TAATTAGCCC AGCTTATACT GTTTTAAAAA CTAAGAGAAA AATTGCCAAT
CAGTATTATA AATATTTGTT TAAGTCATCA GCTTTTATTT CAGAATTACA AACAAGCATT
GTTGGAATAC GAGAAGGAAA AAATATTAGC TATCCTGAGC TATCTTATTC TCTTCTACCA
ATTCCTAAAA TTGATGAGCA ATCCTGTATC GCCACTTTTC TTGACGACAA AACTGCTAAG
ATAGACCAAG CGATATCTAT CAAACAAAAG CAAATAGAAC TACTTAAAGA ACGCAGACAA
ATTCTCATAC ACAAAGCCGT TACCCGTGGG TTGAATCCAA AGGTTAAAAT GAAGGACAGC
GGTGTTGAAT GGATTGGCGA GGTGCCGGAG GGTTGGGAGG TGAAGAAATT ACTTGGATTA
TGTAATTTCA TTAGAGGGAA TTCAAGTTTT GGAAAAGATG ATTTACTAAA TGATGGAGAG
TATGTTGCAT TACAATATGG GAAAACATAT AAAGTAAATG AAGTGAATGA AGAATATAAT
TATTTTGTCA ATAATGAATT TTACAAGGCA AGCCAAATAG TAAATTACGG TGATACTATA
ATTATTGCTA CATCAGAGAC AATTGAAGAA TTGGGGCATA CTGCATATTA TAAAAGAAAT
GATTTAGGTT TAATCGGAGG TGAACAAATA TTGTTGAATC CAAATAATGA TAAAATAAAT
AGTCATTATT TATACTTTAC TTCAAGAGTG TTTTCAAAAG AACTAAGGAA ATATGCAACT
GGAATAAAAG TTTTTAGATT TAATATAAAT GACTTGAAAA CTATATACAT TGCTATTCCG
CCTCTTTCAG AACAACAGCA AATTGTGGAA TATATAGAAA CCACCACAGC CAAAATTGCC
ACTGCCATTT CCCTCAAAGA AAATGAAATA GAAAAGTTAA AAGAATACAA GGCGAATTTG
GTTAATAGTG CGGTAACGGG TAAAATAAAG GTGAGTTAG
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| Protein sequence | MKTKLQKYPA YKDSGVEWLG EIPKHWECIR MKHLFRDYSE KNKQNEELLS VTQNQGVVPR
SWVESRMVMP SGALESFKFI QKGDFAISLR SFEGGLEYCH HDGIISPAYT VLKTKRKIAN
QYYKYLFKSS AFISELQTSI VGIREGKNIS YPELSYSLLP IPKIDEQSCI ATFLDDKTAK
IDQAISIKQK QIELLKERRQ ILIHKAVTRG LNPKVKMKDS GVEWIGEVPE GWEVKKLLGL
CNFIRGNSSF GKDDLLNDGE YVALQYGKTY KVNEVNEEYN YFVNNEFYKA SQIVNYGDTI
IIATSETIEE LGHTAYYKRN DLGLIGGEQI LLNPNNDKIN SHYLYFTSRV FSKELRKYAT
GIKVFRFNIN DLKTIYIAIP PLSEQQQIVE YIETTTAKIA TAISLKENEI EKLKEYKANL
VNSAVTGKIK VS
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