| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_2895 |
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| Symbol | |
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| ID | 4185067 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 3311131 |
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| End bp | 3315105 |
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| Gene Length | 3975 bp |
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| Protein Length | 1324 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 638072884 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_679483 |
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| Protein GI | 110639274 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000343468 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0609683 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGATTCATA ATGCAGCTAC TATGGAAGAA ATTGAATTTT TAAAAAAATC GCTCCAAGAG
GAGATAATAT CTAGGAAACA GCTTGAAATA GAGCTTGAGA AAAACAAGTT AGAAATAGAA
AAACTGAAGA AGAAGTTTAG TAATTCACAT AAAGAAATAT TAGAGAATTA TATAAGAAAA
GAACAAGACT TATTATCCAA TTCGTCTCGC TTGTCTTCTT TAATTGTGAA CCTTGATTCT
GCAATTTTAT TAGAGGATGA AAACCGAAAA ATTGTTTTAG TAAATCAAAA GTTTTGTGAC
ATTTTTGGTA TTCCACTATC ACCTCAGGAA TTGATTGGAA CAGACTGCTC CAATTCTGCA
CAACAATCAA AAATAAAATT TAAAAATCCT GACCAATTCA TCTCTAGAAT TGAAGAGTTA
CTAGAAAATA AAAAAAAAGT ACTTTCTGAT GAGCTTCAAT TAATTGATGG AAAAATATTA
AAACGAGACT TCATACCTGT TTACCATAAT AATGAATATC TCGGACACTT ATGGAATTAT
GAAGATCTAA CGAATTACAT TAATGTAAAA AAGAAAATTG AAAGTTTATC CCGTTTCCCG
AAAGAAAGCC CAAACCCAAT CCTCCGCTGC TCCGCTGATG GAATGGTAAT TTATGCAAAC
GCTGCTGCAA AACCTTTCGT CTCTGTTTTA TCAACTACAA AATACAATTC CAACAATAAT
GTCACTTATG ATTCTCTCGT ATCAAATGTA AAAGCAAGTT TTAAAACCCG GATGCTTTTA
AAAAATGAAA TCCGTATAAA AGATAGAACG TATAATGTTT CTTATGTTCC GGTAGAACAT
GAAGACTACG TTAATATCTA TGCAACTGAT ATTACCAGCA CGAAAGAATC TGAAGAAAAA
ATTTACTTGC TAAAAGAATT GCTAAATCAA CTCGATGAAT TTATCCAGGT AATTGACAAA
GAAGGAAATT TTGTTTTTAT TAATGAAAGC AGTGCGAATA GATTTCAACG AACAATTGAA
GAATTTGAAA CATTGAACAT AAAAAATATT GTTCCTTCTT TTTACAACAA TATGACCTGG
GAAGAACAAT TTGATTTTTT TAAACAAAAA CAAAATTTTT TGCTTGAATC AACCCATACC
AAACCTGATA AAACTTCTTA TCCCATTGAA TCAAGTGTTA AGTATACAAC TGTTCATGAG
AAAGAATACA TCATTTCTTT CTCAAAAGAC ATTAGTGAAA GAAAACGCAC TGAACAAGCA
CTGCAAGATC AGAAACAATT CTATGAAGAT ATTTTAAATA ACATTCCGTC TGACATTGCT
GTGTTTAACA CAAATTACCA ATATCTATAT GTTAATCCTG CTGCAATTAA AGATGAGGAA
ACACGCAAAT GGATTATTGG AAAGACAGAT CTGGATTATT GCAGATATAG AGGAAAAGAT
GATTCCTTAG CGATCATGCG TCGAAAAAAC CATGATATTC TTCATGAATT TAAAAAACCT
ATTGAGTGGG AAGATGTTTT TACCGATAAA GACGGAAATG TCAGTTATGT ATTAAGAAAA
TTCCACCCTG TTTTGGATGA AAATGACAAT ATCAAAATTA TCATTGGGAA TGGAATAAAC
ATAACTGAAA TAAAACAAGT GCAAGAAAAA CTTGCTAAGA GCGAAGAGTT GTATAGACTC
GTTATTCATG CAGCAAACGA TGGAATCTGG GATTGGGATA TCGCTTCCGG AAGTTTATAC
CTCAGTGAGC GTTGGAAATC TATGCTAGGC TATACGGATG AAACATTAGC AAATCATATA
TCTTCCTGGG AAAAAACAAT GCATCCGGAT GATCTATCAA TAGCAAAAGA AATTTTACAG
AACCATTTCG AAAAACGAAA ACCATATAAC TATACATTAA GATATTTACA TGTTGATGGT
TCTATTCGTT GGATCATGTG CAGAGGTTTT GCAATTCGAA ACAGAAAAGG AGAACCATAT
AGAATGGTTG GTAGCTGCAC AGATGTGACA GATACACAAA TAGCAGAAGA AAAATTAAAA
GAAAATGAAG AAAAACTACA AGCAATTTTC AATCACTCTC ATGATGCAAA ATTTTTAGTT
GATCCCTGCA CAAATAAAAT TATTGAGTTT AATAAACGAA CTCTTGAACT ATTTGAAACG
GACAAACCTG ATACATTATA TACTATTCCT CTTACATCTC TTAGAAAATA TCCACTAACT
GACGCTGAAT TGGCAGACAC TCAGAACCAG TTTAAACAAC TTGGATATTG GAATCAGGAA
GTCCTTTATA TAACACAAAA GAAAAATGAA TTTTGGGGAA ACATTGTTGC TAAAACAATA
TTTATTAATA AGAAAGAAGT AATTCTTGTC CGAATTACAG ATATATCTGA AAACAAAAAA
ATTGAGCAGG AACTGATCAA AGCCAAGCAA ATTGCTGAAG AATCAACAAA AGCGAAAGAA
ATGTTCTTAG CTAATATGAG TCATGAAATT CGTACTCCAA TGAATGGTAT ACTTGGTATG
GCTGAACTGA TTTCGCGAAC ATCCTTAGAT GTTACACAAA AGAAACATGT TCAGCTGATT
AAAAATAGTG CGGATAATTT ATTGATTATT ATTAATGACA TTTTAGATAT AGCAAAAATT
GAATCCGGAA AACTAACCAT TGAACAAATT CCATTTGATA TTTGTGAAGT AATAAAAAGT
GCTATTCAGA CCTTAACCTA CAAAGCAGAA GAAAAAGGTA TTGATTTGAT TATACATCCA
ATTAAACTCG ACCATAGAGT TGTTATTGGC GATCCATTCA GACTTACACA AGCACTTTTG
AATTTAATTA ACAATGCGAT TAAATTTACC GAAAACGGTT CCGTAGAAAT CAGTGGACGC
ATTCCGCATT CCAGTTCAAC GGACATCACA TTTGAATTTA CCGTTAAAGA TACGGGGATA
GGTATACCTC AGGAAAAATT AGACAGCATT TTTGAAGGAT TTACTCAAGC ATCCCCTGAT
ACATCCAGAA AATATGGAGG AACGGGACTT GGACTTACTA TCAGTAAGAA CTTAATTCAG
ATGCAAGGTG GTAACATTTG GGTTGAAAGC GTTGTTGGCA AAGGAAGTAA ATTTATTTTT
TCAATCACAT ATAAAAAAGG TGATCTGTTA GATGTCTCTC CAAACAATAA AAATAAAATT
AACCTATATC AACTTCATGA TTTAAAAGTA TTATTAGCTG AAGACAATGA AGTCAATCAA
TATTTTGCAA AAACATTGAT GGATGAAATT GGTGTAAAGG TAGATGTTGC TAATAATGGC
ATTGAAGCCT TTCAGTTCTT TGAACAAAAT GAATATGACA TTATTTTAAT GGACATACAA
ATGCCGTATA TGGGGGGTAT TGAGACAACA TCAAAAATCA GATCGCACGC AAATAAAACG
AAAGCAAAAA TTCCAATTAT TGCTTTAACT GCAAATGCAC TTGTTGGTGA TTCTGAAAAA
TATATTGAAG CCGGAATGAG TGATTATATT TCTAAACCAT TTGATCGGGA AACACTATTT
AGAAAATTAC AACTACATGC AGGTTCAAAC AAAAATATCT TTCAAGATGC AAAGAACATC
CATTTATTTC AATCCGATAC CAATGACGCA TATCTACCAA ACTATAGTCA TTTAGAAAAA
AACTTTCAAA ATAACACCGT TTTTCTCAAA AAAATATTTA CGTTATTCAT TGAATCAACA
CCAGAAATTG TAAACGAATT AAAATTATTT TCTGAAGGTA AGGATTATGA AAAACTACAA
GCAACAGCAC ACAAGTTAAA AGCCAGCGTT GATGCATTCA AAATTGTAGC ATTACATCAA
ACAATAAGAA ATATCGAAAA ATTCGCAGCA AACAAAACCA ATCTGGATGA AATACCTGAT
TTAGTTAAAT CTACAGATGA TATACTTAAA ATTGCTCAAG AAGATATCAC AAAAAAATTA
AAACAAATAG AATAA
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| Protein sequence | MIHNAATMEE IEFLKKSLQE EIISRKQLEI ELEKNKLEIE KLKKKFSNSH KEILENYIRK
EQDLLSNSSR LSSLIVNLDS AILLEDENRK IVLVNQKFCD IFGIPLSPQE LIGTDCSNSA
QQSKIKFKNP DQFISRIEEL LENKKKVLSD ELQLIDGKIL KRDFIPVYHN NEYLGHLWNY
EDLTNYINVK KKIESLSRFP KESPNPILRC SADGMVIYAN AAAKPFVSVL STTKYNSNNN
VTYDSLVSNV KASFKTRMLL KNEIRIKDRT YNVSYVPVEH EDYVNIYATD ITSTKESEEK
IYLLKELLNQ LDEFIQVIDK EGNFVFINES SANRFQRTIE EFETLNIKNI VPSFYNNMTW
EEQFDFFKQK QNFLLESTHT KPDKTSYPIE SSVKYTTVHE KEYIISFSKD ISERKRTEQA
LQDQKQFYED ILNNIPSDIA VFNTNYQYLY VNPAAIKDEE TRKWIIGKTD LDYCRYRGKD
DSLAIMRRKN HDILHEFKKP IEWEDVFTDK DGNVSYVLRK FHPVLDENDN IKIIIGNGIN
ITEIKQVQEK LAKSEELYRL VIHAANDGIW DWDIASGSLY LSERWKSMLG YTDETLANHI
SSWEKTMHPD DLSIAKEILQ NHFEKRKPYN YTLRYLHVDG SIRWIMCRGF AIRNRKGEPY
RMVGSCTDVT DTQIAEEKLK ENEEKLQAIF NHSHDAKFLV DPCTNKIIEF NKRTLELFET
DKPDTLYTIP LTSLRKYPLT DAELADTQNQ FKQLGYWNQE VLYITQKKNE FWGNIVAKTI
FINKKEVILV RITDISENKK IEQELIKAKQ IAEESTKAKE MFLANMSHEI RTPMNGILGM
AELISRTSLD VTQKKHVQLI KNSADNLLII INDILDIAKI ESGKLTIEQI PFDICEVIKS
AIQTLTYKAE EKGIDLIIHP IKLDHRVVIG DPFRLTQALL NLINNAIKFT ENGSVEISGR
IPHSSSTDIT FEFTVKDTGI GIPQEKLDSI FEGFTQASPD TSRKYGGTGL GLTISKNLIQ
MQGGNIWVES VVGKGSKFIF SITYKKGDLL DVSPNNKNKI NLYQLHDLKV LLAEDNEVNQ
YFAKTLMDEI GVKVDVANNG IEAFQFFEQN EYDIILMDIQ MPYMGGIETT SKIRSHANKT
KAKIPIIALT ANALVGDSEK YIEAGMSDYI SKPFDRETLF RKLQLHAGSN KNIFQDAKNI
HLFQSDTNDA YLPNYSHLEK NFQNNTVFLK KIFTLFIEST PEIVNELKLF SEGKDYEKLQ
ATAHKLKASV DAFKIVALHQ TIRNIEKFAA NKTNLDEIPD LVKSTDDILK IAQEDITKKL
KQIE
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