Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_2893 |
Symbol | |
ID | 4185065 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 3307538 |
End bp | 3308260 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 638072882 |
Product | acetyl transferase |
Protein accession | YP_679481 |
Protein GI | 110639272 |
COG category | [R] General function prediction only |
COG ID | [COG0110] Acetyltransferase (isoleucine patch superfamily) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00000824087 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0256653 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGAAATTTC TTAAATACAA GTTTATGAAA CGTATCATTG AAAAACTCAT TCAATTTAGA AATCCTGTTT TTAAATTTGA TTCTAACGTA AGCTCATATG TTTTGTTAAT ACTTTTTTGT GATAAAGCAA TTTCGGTGTT AAGAGGTTTG AAAATACTGT TGTATTTTAA ACGCCCTAAA TTATTGATGC TTGGTAGATC TGTTCGATTT ATGTATGCTC AAAATATTGT CATCGGAAAA TTTGTTAAAC TGGATGATGG GGTTTATTTA AGCGGATTGG GAAAAGGTAA GTTGACTTTA GCAAATAATG TGAGTATTGG TGCCTATAGT AGAATTATTG TATCAACTAG TTTAAATAAT ATTGGGGAAT ATATTCATAT CGGAAATAAT GTTGGTATTG GAGAGTTTGC TTATTTAGGC GGTGGTGGCG GCTTAGAGAT TGGTGATGAT TGTATCATAG GACAATACTT AAGTTGCCAT CCGGAAAATC ATAATTATGA TTCTGTTGAT ACGTTAATCC GTCACCAGGG AGTAAGCAGG CAAGGAATTG TTATAGGGAA AAATTGTTGG ATCGGTTCTA AGGTGACTAT TTTAGATGGT GTCCATATAG GAAATAATTG TGTGATTGCT GCAGGTGCTG TTGTAACCAA GTCTGTTCCG GACAATTCAG TTGTTGGCGG AGTTCCTGCA CGGGTGTTAA AAAGTAGAAT ATCTGATAAG TAA
|
Protein sequence | MKFLKYKFMK RIIEKLIQFR NPVFKFDSNV SSYVLLILFC DKAISVLRGL KILLYFKRPK LLMLGRSVRF MYAQNIVIGK FVKLDDGVYL SGLGKGKLTL ANNVSIGAYS RIIVSTSLNN IGEYIHIGNN VGIGEFAYLG GGGGLEIGDD CIIGQYLSCH PENHNYDSVD TLIRHQGVSR QGIVIGKNCW IGSKVTILDG VHIGNNCVIA AGAVVTKSVP DNSVVGGVPA RVLKSRISDK
|
| |