| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_2808 |
|---|
| Symbol | |
|---|
| ID | 4187193 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cytophaga hutchinsonii ATCC 33406 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008255 |
|---|
| Strand | + |
|---|
| Start bp | 3203603 |
|---|
| End bp | 3204664 |
|---|
| Gene Length | 1062 bp |
|---|
| Protein Length | 353 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 638072799 |
|---|
| Product | membrane fusion protein; cation efflux system protein |
|---|
| Protein accession | YP_679398 |
|---|
| Protein GI | 110639189 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0845] Membrane-fusion protein |
|---|
| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAA TTCTGATTAT AGGCGGCATT TTAGCACTTG TTGCAATCAT TACATTAAGA
TTGATCAGCA ACAAAAAAAC ACTCAACGAA AGCAAGCAGG TTGTTGACCG CTCAAAAATT
CCTGTTTCGG TTTCCGTTAT TGCTGTAGAA GAAAAACCAT TGAACAGTTC GTTTCAATTA
CCCGCATCTC TTGACCCGAT TGAAGAGTCA AAGATTGCTG TTACCGTAGC CGGTAAAATA
ACACGTCTAT CAATTGAAAA CGGATCACGT GTAAGCAAAG GGCAGGTAAT TGGTACCATT
GATTCGCAGC TGAAACAATT GAATCTGGAA GCGGTTGAAT TATCTGAAGC AAAATTAAAA
AGAGACTATG AGCGTACAAA AGAACTGTAC GAAGGAAAAG CGGCAACAGA AACAAATGTG
ATTGATGCAA AATATGCTTA CGATAACAAG CGCATTGAAG CAGACCAGAT CAGAAAGCAG
ATTGCTGATG GAAACATAAT TGCACCTTTC AGCGGCATTA TCTCAAACAA AAGCCTGAAC
GTGGGTGAAT TTACAAACGT AGGTACAGTG ATCGCTACAG TTGTTAATAT TCAGAAATTA
AAAGCGGTTG TATATGTAAA TGAAAAAGAT GCGTACCGTT TACAAAACGG ACAAAACGTA
TCTGTTTCAA CAGATGTTTA CCCGGGACAG GAATTTAAAG GGAAAATTTC GTTCATCAGT
CCGAAAGGAG ATGCTGCACA TAACTACCTG GTAGAAGTAT TAATTGATAA TAATGGTAAA
AATATTTTAA AAGCCGGAAC GTATGTGCTG GTAAAATTCC GTTCGGAGAG TACTGCTTCA
GTTATACAGA TACCTAAAAT TGCATTGGCA GAAGGCCTTA AAAATCCATA TGTATATGTT
GTGAATGGCA ATAAAGTTGC TTCGCGCAAA ATTATTACCG GCCGTGAAGT AGGCGAATAC
GTTGAGGTTG TGAGTGGTTT AAAAACCGGA GAGCAAGTTG TAATCAATGG CCAGATTAAC
CTGACCAATG GAAGTATCAT AAGCATTGTT GGCAACAAAT AA
|
|---|
| Protein sequence | MKKILIIGGI LALVAIITLR LISNKKTLNE SKQVVDRSKI PVSVSVIAVE EKPLNSSFQL
PASLDPIEES KIAVTVAGKI TRLSIENGSR VSKGQVIGTI DSQLKQLNLE AVELSEAKLK
RDYERTKELY EGKAATETNV IDAKYAYDNK RIEADQIRKQ IADGNIIAPF SGIISNKSLN
VGEFTNVGTV IATVVNIQKL KAVVYVNEKD AYRLQNGQNV SVSTDVYPGQ EFKGKISFIS
PKGDAAHNYL VEVLIDNNGK NILKAGTYVL VKFRSESTAS VIQIPKIALA EGLKNPYVYV
VNGNKVASRK IITGREVGEY VEVVSGLKTG EQVVINGQIN LTNGSIISIV GNK
|
|---|
| |