Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_2807 |
Symbol | |
ID | 4187192 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 3202256 |
End bp | 3203581 |
Gene Length | 1326 bp |
Protein Length | 441 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 638072798 |
Product | outer membrane efflux protein/ immunoreative antigen |
Protein accession | YP_679397 |
Protein GI | 110639188 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAATTT ACTCCTTGTG CATTGGATTC TTGTTGTTTA CAACACAAGT ATATGCACAG CAAAAACTCA CCCTCAAAGA ATGTATTGCG TTCAGCCTAC AGAATCATTT AAGCAATAAA GTTTATCTGA ACAATGTAGA GATTGCGAAC CAGCAAGGCA GAGAAGCATT AGCAGGCTAT TTACCTCAGG TAGCCGGTAC GGCAACGTTT GATTACAATA TTAAACGACA AACAACCATC ATTCCTGCAG GCGCATTCAG CCCAACAGAA ACAAGACTGC AATTCGGGCA GCCTTTTTTA ACAACACCGG TCATACAGCT TGATCAGGTA TTATATGATC AGTCGCTGTT ATACGGCATC AAAGCGAACG GTCCGAACAA AGAGATCTCA GCACTTTCAT TAAAACAAAA TCAGGAAACA CTGATCTACA ATACTTCAGC GGCATACATC GAAACGGTTA TTTATTCAGA ACGTATCCGT ATCCTCACAA TTAATGAAAA TAAATATAAA GACCTGTTAG CGATTAAAAA ATTACAGTTC GAAAAGGGTG TTGCCACACA GGTTGAATAC AACCGTATTC TTGTAACCTA CAAAAACATA ACTGCAGAAA AAACGCTTGC CGAAACAAAT AAAGAATTAG CCTTAAACAA GCTGAAAGAT GCCATGGGCA TGACACTTCA GGAATCTTTA TCCATCAACG ATTCGCTGGA TTATGCAAAA CTGATTCCGG ATTCGGATGC GAGCCAGTTT GATGTAACAC AACTATATGC ATATAAAATA AATGCAGAAA AAATTCACTT ACAGGAAATT GATGTGAAGC GAAAACAATC GGCCTTCTTA CCTACCTTGT CCGGTTATGC GCGCTATGGT GCACAGGCAT ATGGCGCAGA ATTCAATACG GCCTTTGACC GATGGTTTGA TTACTCTACT ATAGGTTTAC GTCTGAATGT ACCTATATTC AGCGGTTTCA GAAGAGACAG CCAGTTAAAG CAAAGTAAAT TAACGCTTGA TAACGCAAAA CAGAATTTTA TTATTAATAA CAATACCATG CAGCTTCAGT ATATGAATGC AAATACGCAG TTAAAAAAAT CATATAACGA TGTTGCAAAC AACAAAGAAA ATTTAGAATT AGCTCAGGAA GTATTTGATA TTACAAACCT TGAATATCAG AAAGGCAGTG CTACACTAAC GGATTTATTA AACGCAGAAT ATTCTTTAAA AGAAGCACAG AACAATTACA TTACTTCTAC TTTAAATTTA TTATCCTCTA CTCTTAATAA CGAAAAAGCA AAAGGTACAC TTATACCATT TGCAACTAAA CTATAA
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Protein sequence | MRIYSLCIGF LLFTTQVYAQ QKLTLKECIA FSLQNHLSNK VYLNNVEIAN QQGREALAGY LPQVAGTATF DYNIKRQTTI IPAGAFSPTE TRLQFGQPFL TTPVIQLDQV LYDQSLLYGI KANGPNKEIS ALSLKQNQET LIYNTSAAYI ETVIYSERIR ILTINENKYK DLLAIKKLQF EKGVATQVEY NRILVTYKNI TAEKTLAETN KELALNKLKD AMGMTLQESL SINDSLDYAK LIPDSDASQF DVTQLYAYKI NAEKIHLQEI DVKRKQSAFL PTLSGYARYG AQAYGAEFNT AFDRWFDYST IGLRLNVPIF SGFRRDSQLK QSKLTLDNAK QNFIINNNTM QLQYMNANTQ LKKSYNDVAN NKENLELAQE VFDITNLEYQ KGSATLTDLL NAEYSLKEAQ NNYITSTLNL LSSTLNNEKA KGTLIPFATK L
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