Gene CHU_2807 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_2807 
Symbol 
ID4187192 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp3202256 
End bp3203581 
Gene Length1326 bp 
Protein Length441 aa 
Translation table11 
GC content37% 
IMG OID638072798 
Productouter membrane efflux protein/ immunoreative antigen 
Protein accessionYP_679397 
Protein GI110639188 
COG category[M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1538] Outer membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAATTT ACTCCTTGTG CATTGGATTC TTGTTGTTTA CAACACAAGT ATATGCACAG 
CAAAAACTCA CCCTCAAAGA ATGTATTGCG TTCAGCCTAC AGAATCATTT AAGCAATAAA
GTTTATCTGA ACAATGTAGA GATTGCGAAC CAGCAAGGCA GAGAAGCATT AGCAGGCTAT
TTACCTCAGG TAGCCGGTAC GGCAACGTTT GATTACAATA TTAAACGACA AACAACCATC
ATTCCTGCAG GCGCATTCAG CCCAACAGAA ACAAGACTGC AATTCGGGCA GCCTTTTTTA
ACAACACCGG TCATACAGCT TGATCAGGTA TTATATGATC AGTCGCTGTT ATACGGCATC
AAAGCGAACG GTCCGAACAA AGAGATCTCA GCACTTTCAT TAAAACAAAA TCAGGAAACA
CTGATCTACA ATACTTCAGC GGCATACATC GAAACGGTTA TTTATTCAGA ACGTATCCGT
ATCCTCACAA TTAATGAAAA TAAATATAAA GACCTGTTAG CGATTAAAAA ATTACAGTTC
GAAAAGGGTG TTGCCACACA GGTTGAATAC AACCGTATTC TTGTAACCTA CAAAAACATA
ACTGCAGAAA AAACGCTTGC CGAAACAAAT AAAGAATTAG CCTTAAACAA GCTGAAAGAT
GCCATGGGCA TGACACTTCA GGAATCTTTA TCCATCAACG ATTCGCTGGA TTATGCAAAA
CTGATTCCGG ATTCGGATGC GAGCCAGTTT GATGTAACAC AACTATATGC ATATAAAATA
AATGCAGAAA AAATTCACTT ACAGGAAATT GATGTGAAGC GAAAACAATC GGCCTTCTTA
CCTACCTTGT CCGGTTATGC GCGCTATGGT GCACAGGCAT ATGGCGCAGA ATTCAATACG
GCCTTTGACC GATGGTTTGA TTACTCTACT ATAGGTTTAC GTCTGAATGT ACCTATATTC
AGCGGTTTCA GAAGAGACAG CCAGTTAAAG CAAAGTAAAT TAACGCTTGA TAACGCAAAA
CAGAATTTTA TTATTAATAA CAATACCATG CAGCTTCAGT ATATGAATGC AAATACGCAG
TTAAAAAAAT CATATAACGA TGTTGCAAAC AACAAAGAAA ATTTAGAATT AGCTCAGGAA
GTATTTGATA TTACAAACCT TGAATATCAG AAAGGCAGTG CTACACTAAC GGATTTATTA
AACGCAGAAT ATTCTTTAAA AGAAGCACAG AACAATTACA TTACTTCTAC TTTAAATTTA
TTATCCTCTA CTCTTAATAA CGAAAAAGCA AAAGGTACAC TTATACCATT TGCAACTAAA
CTATAA
 
Protein sequence
MRIYSLCIGF LLFTTQVYAQ QKLTLKECIA FSLQNHLSNK VYLNNVEIAN QQGREALAGY 
LPQVAGTATF DYNIKRQTTI IPAGAFSPTE TRLQFGQPFL TTPVIQLDQV LYDQSLLYGI
KANGPNKEIS ALSLKQNQET LIYNTSAAYI ETVIYSERIR ILTINENKYK DLLAIKKLQF
EKGVATQVEY NRILVTYKNI TAEKTLAETN KELALNKLKD AMGMTLQESL SINDSLDYAK
LIPDSDASQF DVTQLYAYKI NAEKIHLQEI DVKRKQSAFL PTLSGYARYG AQAYGAEFNT
AFDRWFDYST IGLRLNVPIF SGFRRDSQLK QSKLTLDNAK QNFIINNNTM QLQYMNANTQ
LKKSYNDVAN NKENLELAQE VFDITNLEYQ KGSATLTDLL NAEYSLKEAQ NNYITSTLNL
LSSTLNNEKA KGTLIPFATK L